RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 ITIH5Q86UX2 942 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 LRRTM3Q86VH5 581 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 RALGPS2Q86X27 583 aaPredicted RBP9.99□□□□□ -0.81
VPS26B-207ENST00000532160 FBXL13Q8NEE6 735 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 BPIFB1Q8TDL5 484 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 GIPC2Q8TF65 315 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 TATDN2Q93075 761 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 HPDLQ96IR7 371 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 RTKNQ9BST9 563 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 ZCWPW1Q9H0M4 648 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 XYLT2Q9H1B5 865 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 TASP1Q9H6P5 420 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 APOBEC3GQ9HC16 384 aaKnown RBP9.99□□□□□ -0.81
VPS26B-207ENST00000532160 KCND1Q9NSA2 647 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 RAB20Q9NX57 234 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 OBP2AQ9NY56 170 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 NXF1Q9UBU9 619 aaKnown RBP9.99□□□□□ -0.81
VPS26B-207ENST00000532160 SNX9Q9Y5X1 595 aa9.99□□□□□ -0.81
VPS26B-207ENST00000532160 UQCRHLA0A096LP55 91 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 KPNA7A9QM74 516 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 CYB561D2O14569 222 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 ATMINO43313 823 aaPredicted RBP9.98□□□□□ -0.81
VPS26B-207ENST00000532160 CBFA2T2O43439 604 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 HCRTO43612 131 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 GDF9O60383 454 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 LRP3O75074 770 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 FGF19O95750 216 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 SERPINC1P01008 464 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 UQCRHP07919 91 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 SLC9A1P19634 815 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 WEE1P30291 646 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 RAP1GAPP47736 663 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 FANCCQ00597 558 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 ENPEPQ07075 957 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 WDR72Q3MJ13 1102 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 SV2CQ496J9 727 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 DGKKQ5KSL6 1271 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 C1orf228Q6PIY5 440 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 PRR23CQ6ZRP0 262 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 TMEM150AQ86TG1 271 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 LONP2Q86WA8 852 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 LRRC52Q8N7C0 313 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 STKLD1Q8NE28 680 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 ANKRD20A12PQ8NF67 263 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 RIN3Q8TB24 985 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 CHFRQ96EP1 664 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 ZNF560Q96MR9 790 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 SLC46A2Q9BY10 475 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 HPS4Q9NQG7 708 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 SEMA4GQ9NTN9 838 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 TMLHEQ9NVH6 421 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 ABI2Q9NYB9 513 aaPredicted RBP9.98□□□□□ -0.81
VPS26B-207ENST00000532160 GCNT4Q9P109 453 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 HSFX1Q9UBD0 423 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 DSEQ9UL01 958 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 CCL26Q9Y258 94 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 USP24Q9UPU5 2620 aa9.98□□□□□ -0.81
VPS26B-207ENST00000532160 CFAP47Q6ZTR5 3102 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 OTOL1A6NHN0 477 aaPredicted RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 SLC30A4O14863 429 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 AP5Z1O43299 807 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 ASS1P00966 412 aaKnown RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 HAPLN1P10915 354 aaPredicted RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 CDC25CP30307 473 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 PXNP49023 591 aaPredicted RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 TUFMP49411 452 aaKnown RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 GPR15P49685 360 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 CDH8P55286 799 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 NOP14P78316 857 aaKnown RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 UBXN1Q04323 297 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 KCNMA1Q12791 1236 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 MYO1EQ12965 1108 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 VEPH1Q14D04 833 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 SGSM1Q2NKQ1 1148 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 ZNF667Q5HYK9 610 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 SDHAF4Q5VUM1 108 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 TRIM68Q6AZZ1 485 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 GJB7Q6PEY0 223 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 ARHGEF19Q8IW93 802 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 FAM160A2Q8N612 972 aaPredicted RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 CCDC150Q8NCX0 1101 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 EHBP1Q8NDI1 1231 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 LMO3Q8TAP4 145 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 NETO1Q8TDF5 533 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 KAT5Q92993 513 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 GCNAQ96QF7 691 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 MMS19Q96T76 1030 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 INTS2Q9H0H0 1204 aaKnown RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 SDCBP2Q9H190 292 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 SMYD3Q9H7B4 428 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 POLR3BQ9NW08 1133 aaPredicted RBP9.97□□□□□ -0.81
VPS26B-207ENST00000532160 IFNKQ9P0W0 207 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 L1RE1Q9UN81 338 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 COQ4Q9Y3A0 265 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 MYO16Q9Y6X6 1858 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 ANAPC1Q9H1A4 1944 aa9.97□□□□□ -0.81
VPS26B-207ENST00000532160 LRRC10BA6NIK2 292 aa9.96□□□□□ -0.82
VPS26B-207ENST00000532160 LGALS16A8MUM7 142 aa9.96□□□□□ -0.82
VPS26B-207ENST00000532160 TADA3O75528 432 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms