RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 CHFRQ96EP1 664 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 SPATA17Q96L03 361 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 C8orf48Q96LL4 319 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 MYRFLQ96LU7 910 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 OBP2AQ9NY56 170 aa20.25■□□□□ 0.83
PKP3-204ENST00000526971 MAGED2Q9UNF1 606 aaPredicted RBP20.25■□□□□ 0.83
PKP3-204ENST00000526971 ANAPC1Q9H1A4 1944 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 CLDN5O00501 218 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 TRIM66O15016 1216 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 CILPO75339 1184 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 MBD3O95983 291 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 F11P03951 625 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 CCDC192P0DO97 292 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 CD58P19256 250 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 ORC1Q13415 861 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 CSRP2Q16527 193 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 ARHGAP15Q53QZ3 475 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 PPM1JQ5JR12 505 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 RBM43Q6ZSC3 357 aaKnown RBP20.24■□□□□ 0.83
PKP3-204ENST00000526971 TMEM150AQ86TG1 271 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 TRMT2BQ96GJ1 504 aaKnown RBP20.24■□□□□ 0.83
PKP3-204ENST00000526971 TWNKQ96RR1 684 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 NT5C1AQ9BXI3 368 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 SLC46A2Q9BY10 475 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 TASP1Q9H6P5 420 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 DACH1Q9UI36 760 aa20.24■□□□□ 0.83
PKP3-204ENST00000526971 F8VP50 259 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 P4HA2O15460 535 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 ANXA13P27216 316 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 ERCC5P28715 1186 aaPredicted RBP20.23■□□□□ 0.83
PKP3-204ENST00000526971 WEE1P30291 646 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 CACNA2D1P54289 1103 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 PAQR9Q6ZVX9 377 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 TTC39CQ8N584 583 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 RIN3Q8TB24 985 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 WHAMMQ8TF30 809 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 MED10Q9BTT4 135 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 UXTQ9UBK9 157 aaPredicted RBP20.23■□□□□ 0.83
PKP3-204ENST00000526971 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.23■□□□□ 0.83
PKP3-204ENST00000526971 ATP8B3O60423 1300 aa20.23■□□□□ 0.83
PKP3-204ENST00000526971 OTOL1A6NHN0 477 aaPredicted RBP20.22■□□□□ 0.83
PKP3-204ENST00000526971 TRIM21P19474 475 aaKnown RBP20.22■□□□□ 0.83
PKP3-204ENST00000526971 CNR2P34972 360 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 CETN1Q12798 172 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 KCNH2Q12809 1159 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 CT47A1Q5JQC4 288 aaPredicted RBP20.22■□□□□ 0.83
PKP3-204ENST00000526971 FAM35AQ86V20 835 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 WDR5BQ86VZ2 330 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 IRF2BP1Q8IU81 584 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 FUKQ8N0W3 1084 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 C12orf29Q8N999 325 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 CNOT6LQ96LI5 555 aaKnown RBP20.22■□□□□ 0.83
PKP3-204ENST00000526971 ARID3AQ99856 593 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 DNAI2Q9GZS0 605 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 FAM124BQ9H5Z6 455 aaPredicted RBP20.22■□□□□ 0.83
PKP3-204ENST00000526971 HPS4Q9NQG7 708 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 CISHQ9NSE2 258 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 TMEM30AQ9NV96 361 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 CCL26Q9Y258 94 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 LAMA1P25391 3075 aa20.22■□□□□ 0.83
PKP3-204ENST00000526971 AFPP02771 609 aaKnown RBP20.21■□□□□ 0.83
PKP3-204ENST00000526971 CCDC130P13994 396 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 HOXA6P31267 233 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 PXNP49023 591 aaPredicted RBP20.21■□□□□ 0.83
PKP3-204ENST00000526971 PLCB2Q00722 1185 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 CUL2Q13617 745 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 TPD52L1Q16890 204 aaPredicted RBP20.21■□□□□ 0.83
PKP3-204ENST00000526971 ITPRIPL2Q3MIP1 535 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 TRIM68Q6AZZ1 485 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 FSTL4Q6MZW2 842 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 DENND5BQ6ZUT9 1274 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 LMO3Q8TAP4 145 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 SLC2A14Q8TDB8 520 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 SMARCD1Q96GM5 515 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 POLR3BQ9NW08 1133 aaPredicted RBP20.21■□□□□ 0.83
PKP3-204ENST00000526971 EHD2Q9NZN4 543 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 ZMYM5Q9UJ78 669 aa20.21■□□□□ 0.83
PKP3-204ENST00000526971 HELZP42694 1942 aaKnown RBP20.2■□□□□ 0.82
PKP3-204ENST00000526971 SOBPA7XYQ1 873 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 DDX6P26196 483 aaKnown RBP eCLIP20.2■□□□□ 0.82
PKP3-204ENST00000526971 USP46P62068 366 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 LRMPQ12912 555 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 CCDC6Q16204 474 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 CEP68Q76N32 757 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 CREBRFQ8IUR6 639 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 CMTM8Q8IZV2 173 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 EHBP1Q8NDI1 1231 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 MRPS31Q92665 395 aaKnown RBP20.2■□□□□ 0.82
PKP3-204ENST00000526971 KCNK16Q96T55 309 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 HNRNPABQ99729 332 aaKnown RBP20.2■□□□□ 0.82
PKP3-204ENST00000526971 FAM83CQ9BQN1 747 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 TTLL2Q9BWV7 592 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 THAP9Q9H5L6 903 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 GKN1Q9NS71 199 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 FAM49BQ9NUQ9 324 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 ZFHX4Q86UP3 3567 aa20.2■□□□□ 0.82
PKP3-204ENST00000526971 TADA3O75528 432 aa20.19■□□□□ 0.82
PKP3-204ENST00000526971 AP1G2O75843 785 aa20.19■□□□□ 0.82
PKP3-204ENST00000526971 TBXAS1P24557 533 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms