RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 MNS1Q8NEH6 495 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 TMIEQ8NEW7 156 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 PJA1Q8NG27 643 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 HASPINQ8TF76 798 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 TFAP2BQ92481 460 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 TTC14Q96N46 770 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 ZNF830Q96NB3 372 aaPredicted RBP3.6□□□□□ -1.83
COPB1-205ENST00000526527 KLHL32Q96NJ5 620 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 NEUROD6Q96NK8 337 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 TRIB1Q96RU8 372 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 TRIM54Q9BYV2 358 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 ZNF518BQ9C0D4 1074 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 PDCL3Q9H2J4 239 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 RETREG1Q9H6L5 497 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 ZMAT3Q9HA38 289 aaKnown RBP3.6□□□□□ -1.83
COPB1-205ENST00000526527 DDX20Q9UHI6 824 aaKnown RBP3.6□□□□□ -1.83
COPB1-205ENST00000526527 HDAC9Q9UKV0 1011 aa3.6□□□□□ -1.83
COPB1-205ENST00000526527 PRAMEF33A0A0G2JMD5 474 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 A0A1W2PS29 197 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 CCDC151A5D8V7 595 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 MBD3L4A6NDZ8 208 aaPredicted RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 MBD3L3A6NE82 208 aaPredicted RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 RHPN2P1A8MT19 583 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 TBX3O15119 743 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 IPO8O15397 1037 aaKnown RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 MPPED1O15442 326 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 PRAMEF10O60809 474 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 UNC5CO95185 931 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 RPN1P04843 607 aaKnown RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 SRGNP10124 158 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 KITP10721 976 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 ZKSCAN1P17029 563 aaPredicted RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 KLRC1P26715 233 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 ITPKBP27987 946 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 CCKBRP32239 447 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 GRIA3P42263 894 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 TDO2P48775 406 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 PPM1FP49593 454 aaPredicted RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 ANXA11P50995 505 aaKnown RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 KRT17Q04695 432 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 FPGSQ05932 587 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 BTKQ06187 659 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 PDE1CQ14123 709 aaPredicted RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 HLXQ14774 488 aaPredicted RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 MGAT5BQ3V5L5 792 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 FAM133BQ5BKY9 247 aaKnown RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 APOA5Q6Q788 366 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 MTERF4Q7Z6M4 381 aaKnown RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 KRT77Q7Z794 578 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 AMIGO2Q86SJ2 522 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 CFAP52Q8N1V2 620 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 MPP5Q8N3R9 675 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 SVIPQ8NHG7 77 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 IL31RAQ8NI17 732 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 ITFG2Q969R8 447 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 TMEM125Q96AQ2 219 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 TIFAQ96CG3 184 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 APIPQ96GX9 242 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 FBXL20Q96IG2 436 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 PPP1R9BQ96SB3 815 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 C22orf23Q9BZE7 217 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 UNKQ9C0B0 810 aaKnown RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 TSPYL1Q9H0U9 437 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 RANBP17Q9H2T7 1088 aaKnown RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 AS3MTQ9HBK9 375 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 ARNT2Q9HBZ2 717 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 INTS13Q9NVM9 706 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 VSX1Q9NZR4 365 aaPredicted RBP3.59□□□□□ -1.83
COPB1-205ENST00000526527 POLG2Q9UHN1 485 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 PRDM4Q9UKN5 801 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 ACAD8Q9UKU7 415 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 ASAP1Q9ULH1 1129 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 PADI4Q9UM07 663 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 FAM50BQ9Y247 325 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 RAD54BQ9Y620 910 aa3.59□□□□□ -1.83
COPB1-205ENST00000526527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.59□□□□□ -1.83
COPB1-205ENST00000526527 BTN3A1O00481 513 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 PROM1O43490 865 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 FGAP02671 866 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 PRKCGP05129 697 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 IGKV2-30P06310 120 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 MYL3P08590 195 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 MYF5P13349 255 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 NPR1P16066 1061 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 GATA3P23771 443 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 LRPAP1P30533 357 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 SLC6A4P31645 630 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 PHKA1P46020 1223 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 NDUFV1P49821 464 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 SLC20A2Q08357 652 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 WASHC5Q12768 1159 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 IQCB1Q15051 598 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 CNGA2Q16280 664 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 SRSF7Q16629 238 aaKnown RBP eCLIP3.58□□□□□ -1.84
COPB1-205ENST00000526527 INSCQ1MX18 579 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 MAP9Q49MG5 647 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 ALFQ53S48 1182 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 CCDC158Q5M9N0 1113 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 CTR9Q6PD62 1173 aa3.58□□□□□ -1.84
COPB1-205ENST00000526527 YAF2Q8IY57 180 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms