RNA–Protein interactions for RNA: ENST00000508386.1

KDM3B-205, Transcript of lysine demethylase 3B, humanhuman

TSL 4

Gene KDM3B, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-205ENST00000508386 CXorf38Q8TB03 319 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 SPPL2BQ8TCT7 592 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 C2orf15Q8WU43 125 aaKnown RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 WBP2Q969T9 261 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 P2RY11Q96G91 374 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 TRMT2BQ96GJ1 504 aaKnown RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 YTHDC1Q96MU7 727 aaKnown RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 UBL7Q96S82 380 aaPredicted RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 PYM1Q9BRP8 204 aaKnown RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 TM6SF1Q9BZW5 370 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 TRIM9Q9C026 710 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 CCSER1Q9C0I3 900 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 TMEM206Q9H813 350 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 PDRG1Q9NUG6 133 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 ZMYM5Q9UJ78 669 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 CPSF3Q9UKF6 684 aaKnown RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 FNDC3AQ9Y2H6 1198 aaKnown RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 RBM19Q9Y4C8 960 aaKnown RBP6.16□□□□□ -1.42
KDM3B-205ENST00000508386 PCDHB5Q9Y5E4 795 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 NUMA1Q14980 2115 aa6.16□□□□□ -1.42
KDM3B-205ENST00000508386 TRAV19A0A0A6YYK7 116 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 A0A1W2PQD8 194 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ANKRD63C9JTQ0 380 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 AP5Z1O43299 807 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ATP2C2O75185 946 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ALDH1A2O94788 518 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 CD2BP2O95400 341 aaKnown RBP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 OR52Z1P0C646 297 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 CSH1P0DML2 217 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 CSH2P0DML3 217 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PLS3P13797 630 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 MUTP22033 750 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 GUCY2CP25092 1073 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 EIF2S3P41091 472 aaKnown RBP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 TNFRSF4P43489 277 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ATP2C1P98194 919 aaPredicted RBP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 GUCY1B3Q02153 619 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 KDSRQ06136 332 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PPP2R3AQ06190 1150 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 SMARCB1Q12824 385 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PDIA5Q14554 519 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 SMAD1Q15797 465 aaKnown RBP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ME3Q16798 604 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PLEKHG6Q3KR16 790 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 CRELD2Q6UXH1 353 aaPredicted RBP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 LIAT1Q6ZQX7 453 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ZNF605Q86T29 641 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PGBD3Q8N328 593 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PDCL2Q8N4E4 241 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 IGSF22Q8N9C0 903 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 NSUN7Q8NE18 718 aaKnown RBP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ZSWIM2Q8NEG5 633 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 C1orf216Q8TAB5 229 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 KCNN1Q92952 543 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 SPACA7Q96KW9 195 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 HSPA12BQ96MM6 686 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PNMA5Q96PV4 448 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 FIZ1Q96SL8 496 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PNKPQ96T60 521 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 ZMYND15Q9H091 742 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PRDM16Q9HAZ2 1276 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 TMEM30AQ9NV96 361 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 BCCIPQ9P287 314 aaKnown RBP eCLIP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 GTF3C4Q9UKN8 822 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 L1RE1Q9UN81 338 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 CYP8B1Q9UNU6 501 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 APOBEC2Q9Y235 224 aaKnown RBP6.15□□□□□ -1.42
KDM3B-205ENST00000508386 PCDHB9Q9Y5E1 797 aa6.15□□□□□ -1.42
KDM3B-205ENST00000508386 UBR5O95071 2799 aaPredicted RBP6.15□□□□□ -1.43
KDM3B-205ENST00000508386 NOTCH2Q04721 2471 aa6.15□□□□□ -1.43
KDM3B-205ENST00000508386 ZNF840PA6NDX5 716 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 MYMKA6NI61 221 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 KPNA7A9QM74 516 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 WASH3PC4AMC7 463 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 OGTO15294 1046 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 CILPO75339 1184 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 CDKL5O76039 1030 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 NFATC1O95644 943 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 OLFM2O95897 454 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 F12P00748 615 aaPredicted RBP6.14□□□□□ -1.43
KDM3B-205ENST00000508386 PIGRP01833 764 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 APODP05090 189 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 SYPP08247 313 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 XBP1P17861 261 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 GRIA2P42262 883 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 DPP6P42658 865 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 ACOT2P49753 483 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 TOB1P50616 345 aaPredicted RBP6.14□□□□□ -1.43
KDM3B-205ENST00000508386 NCKAP1LP55160 1127 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 SLC7A9P82251 487 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 NR1H3Q13133 447 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 HSF5Q4G112 596 aaPredicted RBP6.14□□□□□ -1.43
KDM3B-205ENST00000508386 EOGTQ5NDL2 527 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 LY6G5CQ5SRR4 150 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 EGFLAMQ63HQ2 1017 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 FAM171BQ6P995 826 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 THEM5Q8N1Q8 247 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 NAT16Q8N8M0 369 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 ERMNQ8TAM6 284 aa6.14□□□□□ -1.43
KDM3B-205ENST00000508386 SPATA18Q8TC71 538 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms