RNA–Protein interactions for RNA: ENST00000488741.5

CREM-238, Transcript of cAMP responsive element modulator, human

TSL 2 BASIC

Gene CREM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CREM-238	ENST00000488741	AMPD1	P23109	780 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	ADRA1D	P25100	572 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	SERPINB3	P29508	390 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	DNAJA1	P31689	397 aa	Known RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PIK3CA	P42336	1068 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	ECE1	P42892	770 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	VPS41	P49754	854 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	SERPINB8	P50452	374 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	NEK3	P51956	506 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	CHN2	P52757	468 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	CYP4A11	Q02928	519 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PPP3CA	Q08209	521 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PDIA2	Q13087	525 aa	Known RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	GRAP	Q13588	217 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	CYLC2	Q14093	348 aa	Predicted RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	COG2	Q14746	738 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PLEKHG4	Q58EX7	1191 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	RNASEH2B	Q5TBB1	312 aa	Known RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	LRRC38	Q5VT99	294 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	TTBK2	Q6IQ55	1244 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	BORA	Q6PGQ7	559 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	NSMF	Q6X4W1	530 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	B3GNT6	Q6ZMB0	384 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	RIPOR1	Q6ZS17	1223 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	ZNF438	Q7Z4V0	828 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	DHDDS	Q86SQ9	333 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	SLC47A2	Q86VL8	602 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	TXNRD3	Q86VQ6	643 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	RASSF3	Q86WH2	238 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	FBXO11	Q86XK2	927 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	TMEM126B	Q8IUX1	230 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PPIL6	Q8IXY8	311 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PPM1K	Q8N3J5	372 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	CATSPER1	Q8NEC5	780 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	GRAPL	Q8TC17	118 aa	Predicted RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	TCP10L	Q8TDR4	215 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	DDI1	Q8WTU0	396 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PYROXD1	Q8WU10	500 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	MZB1	Q8WU39	189 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	FAM172A	Q8WUF8	416 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	DDX1	Q92499	740 aa	Known RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	NKD2	Q969F2	451 aa	Predicted RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	MKL1	Q969V6	931 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	HAUS1	Q96CS2	278 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	MTBP	Q96DY7	904 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	DYDC2	Q96IM9	177 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	KREMEN1	Q96MU8	473 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	ZIC5	Q96T25	663 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PAFAH2	Q99487	392 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	KLHL4	Q9C0H6	718 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	TMEM117	Q9H0C3	514 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	KCNK13	Q9HB14	408 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	S100A14	Q9HCY8	104 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	METTL5	Q9NRN9	209 aa	Known RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	TBCCD1	Q9NVR7	557 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	RAB20	Q9NX57	234 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	MKS1	Q9NXB0	559 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	TOR4A	Q9NXH8	423 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	GALNT8	Q9NY28	637 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	DDX56	Q9NY93	547 aa	Known RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	NYAP2	Q9P242	653 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PRKAG2	Q9UGJ0	569 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	IP6K2	Q9UHH9	426 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PADI4	Q9UM07	663 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	EXOC7	Q9UPT5	735 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	ZNF148	Q9UQR1	794 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	R3HDM2	Q9Y2K5	976 aa	Known RBP	5.36	□□□□□ -1.55
CREM-238	ENST00000488741	PPME1	Q9Y570	386 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	KCNMB2	Q9Y691	235 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	RPS6KL1	Q9Y6S9	549 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	CNTNAP4	Q9C0A0	1308 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	QSER1	Q2KHR3	1735 aa		5.36	□□□□□ -1.55
CREM-238	ENST00000488741	MYH14	Q7Z406	1995 aa	Known RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	RGPD3	A6NKT7	1758 aa	Predicted RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	RGPD4	Q7Z3J3	1758 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	CLUH	O75153	1309 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	FIGNL2	A6NMB9	653 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	FAM86B1	E9PN63	330 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741		H3BRJ5	948 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	PLSCR1	O15162	318 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	SPINT1	O43278	529 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	GRIN3B	O60391	1043 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	CCNT2	O60583	730 aa	Known RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	PFDN1	O60925	122 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	KLHL2	O95198	593 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	BAG2	O95816	211 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	CYP1A1	P04798	512 aa	Predicted RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	SERPINA6	P08185	405 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	FAM86B2	P0C5J1	330 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	FGFR1	P11362	822 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	MYL4	P12829	197 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	AOC1	P19801	751 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	YY1	P25490	414 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	TPP2	P29144	1249 aa	Predicted RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	STIP1	P31948	543 aa	Known RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	SLC16A2	P36021	539 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	ETV4	P43268	484 aa		5.35	□□□□□ -1.55
CREM-238	ENST00000488741	NSF	P46459	744 aa	Known RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	RPL5	P46777	297 aa	Known RBP	5.35	□□□□□ -1.55
CREM-238	ENST00000488741	GCLM	P48507	274 aa		5.35	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms