RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 CHORDC1Q9UHD1 332 aaPredicted RBP9.56□□□□□ -0.88
USF1-204ENST00000472217 PCDHA5Q9Y5H7 936 aa9.56□□□□□ -0.88
USF1-204ENST00000472217 DMDP11532 3685 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 HHLA1C9JL84 531 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 CETN3O15182 167 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 HRO43593 1189 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 CILPO75339 1184 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 SMC2O95347 1197 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 ZDHHC11BP0C7U3 371 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 FAM200BP0CF97 657 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 EPB41P11171 864 aaKnown RBP9.55□□□□□ -0.88
USF1-204ENST00000472217 CD58P19256 250 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 DRD1P21728 446 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 HOXA6P31267 233 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 OPRD1P41143 372 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 ID4P47928 161 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 PGFP49763 221 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 MXI1P50539 228 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 PMS1P54277 932 aaKnown RBP9.55□□□□□ -0.88
USF1-204ENST00000472217 LPAL2Q16609 132 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 GAB4Q2WGN9 574 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 FBXO43Q4G163 708 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 HECTD3Q5T447 861 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 SNX30Q5VWJ9 437 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 PRR23BQ6ZRT6 265 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 CLEC20AQ6ZU45 233 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 GPRIN1Q7Z2K8 1008 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 DDX42Q86XP3 938 aaKnown RBP eCLIP9.55□□□□□ -0.88
USF1-204ENST00000472217 KIAA1958Q8N8K9 716 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 CCDC150Q8NCX0 1101 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 FBXL13Q8NEE6 735 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 SEMA4DQ92854 862 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 SMARCE1Q969G3 411 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 EXOC4Q96A65 974 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 JAKMIP2Q96AA8 810 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 CYFIP2Q96F07 1278 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 TIGD1Q96MW7 591 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 HNRNPABQ99729 332 aaKnown RBP9.55□□□□□ -0.88
USF1-204ENST00000472217 TSG101Q99816 390 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 NT5C1AQ9BXI3 368 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 CCSER2Q9H7U1 834 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 CYP3A43Q9HB55 503 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 POLR3BQ9NW08 1133 aaPredicted RBP9.55□□□□□ -0.88
USF1-204ENST00000472217 COMMD8Q9NX08 183 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 GVINP1Q7Z2Y8 2422 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 FAM186AA6NE01 2351 aa9.55□□□□□ -0.88
USF1-204ENST00000472217 TRIM49BA6NDI0 452 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 SLC9A3R1O14745 358 aaPredicted RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 SLC16A3O15427 465 aaKnown RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 STX10O60499 249 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 ATG13O75143 517 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 TRIM21P19474 475 aaKnown RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 CNR2P34972 360 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 PXNP49023 591 aaPredicted RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 TUBP50607 506 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 SIM2Q14190 667 aaPredicted RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 CBWD6Q4V339 395 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 ZNF394Q53GI3 561 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 DCAF17Q5H9S7 520 aaPredicted RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 CBWD3Q5JTY5 395 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 CBWD5Q5RIA9 395 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 TCERG1LQ5VWI1 586 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 ANKRD40Q6AI12 368 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 LAIR1Q6GTX8 287 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 RHBDF2Q6PJF5 856 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 WDR5BQ86VZ2 330 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 ZC3H3Q8IXZ2 948 aaKnown RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 ADGRG2Q8IZP9 1017 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 RPLP0P6Q8NHW5 317 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 SECISBP2LQ93073 1101 aaKnown RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 RMDN1Q96DB5 314 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 ARID3AQ99856 593 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 RAB20Q9NX57 234 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 HOOK1Q9UJC3 728 aaKnown RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 GMEB2Q9UKD1 530 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 RAB23Q9ULC3 237 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 SLC8A2Q9UPR5 921 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 VPS13AQ96RL7 3174 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 OTOGLQ3ZCN5 2332 aa9.54□□□□□ -0.88
USF1-204ENST00000472217 RIF1Q5UIP0 2472 aaKnown RBP9.54□□□□□ -0.88
USF1-204ENST00000472217 ZNF292O60281 2723 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 E2F8A0AVK6 867 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 CYP26A1O43174 497 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 TLR5O60602 858 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 ACO1P21399 889 aaKnown RBP9.53□□□□□ -0.88
USF1-204ENST00000472217 TGM1P22735 817 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 FKBP3Q00688 224 aaKnown RBP9.53□□□□□ -0.88
USF1-204ENST00000472217 LRRC63Q05C16 580 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 MESP2Q0VG99 397 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 DHCR24Q15392 516 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 PPP1R26Q5T8A7 1209 aaPredicted RBP9.53□□□□□ -0.88
USF1-204ENST00000472217 ISM2Q6H9L7 571 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 CEP68Q76N32 757 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 SYT13Q7L8C5 426 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.53□□□□□ -0.88
USF1-204ENST00000472217 SLC4A11Q8NBS3 891 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 TATDN2Q93075 761 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 WBP2Q969T9 261 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 SLC35C1Q96A29 364 aa9.53□□□□□ -0.88
USF1-204ENST00000472217 ACDQ96AP0 544 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms