RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 CNTNAP3BQ96NU0 1288 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 PNKPQ96T60 521 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 SMOQ99835 787 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 CNTNAP3Q9BZ76 1288 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 CCSER2Q9H7U1 834 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 IL37Q9NZH6 218 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 ZDHHC9Q9Y397 364 aa14.09□□□□□ -0.15
CPSF4-210ENST00000469897 P4HA1P13674 534 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 CCDC130P13994 396 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 GBP1P32455 592 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 PGFP49763 221 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 SLC5A3P53794 718 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 ZACNQ401N2 412 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 PLA2G2CQ5R387 149 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 C1orf220Q5T0J3 134 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 TTC30AQ86WT1 665 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 CRYBG2Q8N1P7 616 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 KIAA1958Q8N8K9 716 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 NAT16Q8N8M0 369 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 C12orf29Q8N999 325 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 ZMIZ2Q8NF64 920 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 SLC2A14Q8TDB8 520 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 TMC2Q8TDI7 906 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 OVCA2Q8WZ82 227 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 WBP2Q969T9 261 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 TPSD1Q9BZJ3 242 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 DMAP1Q9NPF5 467 aaPredicted RBP14.08□□□□□ -0.16
CPSF4-210ENST00000469897 ZDHHC4Q9NPG8 344 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 GMIPQ9P107 970 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 TBC1D14Q9P2M4 693 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 USP25Q9UHP3 1055 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 MAPK8IP1Q9UQF2 711 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 HPSEQ9Y251 543 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 FRMD4BQ9Y2L6 1034 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 ATP8B3O60423 1300 aa14.08□□□□□ -0.16
CPSF4-210ENST00000469897 E2F8A0AVK6 867 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 IKBKBO14920 756 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 CALUO43852 315 aaPredicted RBP14.07□□□□□ -0.16
CPSF4-210ENST00000469897 RHOBTB1O94844 696 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 PRR29P0C7W0 189 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 KCNA4P22459 653 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 TIE1P35590 1138 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 SYKP43405 635 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 NDUFA8P51970 172 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 MAP3K7CLP57077 242 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 MRPS21P82921 87 aaKnown RBP14.07□□□□□ -0.16
CPSF4-210ENST00000469897 CREB5Q02930 508 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 ELF2Q15723 593 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 CRY1Q16526 586 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 USP39Q53GS9 565 aaKnown RBP14.07□□□□□ -0.16
CPSF4-210ENST00000469897 LY6G5CQ5SRR4 150 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 SNX30Q5VWJ9 437 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 IL31Q6EBC2 164 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 ANO7Q6IWH7 933 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 C12orf40Q86WS4 652 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 DDX42Q86XP3 938 aaKnown RBP eCLIP14.07□□□□□ -0.16
CPSF4-210ENST00000469897 ALLCQ8N6M5 410 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 TAF4BQ92750 862 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 SMARCD1Q96GM5 515 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 ZFRQ96KR1 1074 aaKnown RBP14.07□□□□□ -0.16
CPSF4-210ENST00000469897 KRT82Q9NSB4 513 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 FAM49BQ9NUQ9 324 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 COMMD8Q9NX08 183 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 HMGXB4Q9UGU5 601 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 MMP17Q9ULZ9 603 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 TRAF3IP3Q9Y228 551 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 SH3BP1Q9Y3L3 701 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 PCDHGA5Q9Y5G8 931 aa14.07□□□□□ -0.16
CPSF4-210ENST00000469897 A0A0A0MRY4 1105 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 FAM92AA1XBS5 289 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 KAT7O95251 611 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 TBX18O95935 607 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 ADH1CP00326 375 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 ASS1P00966 412 aaKnown RBP14.06□□□□□ -0.16
CPSF4-210ENST00000469897 HLA-DRAP01903 254 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 APODP05090 189 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 MYL1P05976 194 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 ADRB1P08588 477 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 ZDHHC11BP0C7U3 371 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 ADH5P11766 374 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 HNRNPLP14866 589 aaKnown RBP eCLIP14.06□□□□□ -0.16
CPSF4-210ENST00000469897 ADORA2BP29275 332 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 MPLP40238 635 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 GRIA2P42262 883 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 GCLMP48507 274 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 VAMP7P51809 220 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 GAD2Q05329 585 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 TCEAL6Q6IPX3 200 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 TMEM92Q6UXU6 159 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 UNC93AQ86WB7 457 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 TMEM25Q86YD3 366 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 BBS7Q8IWZ6 715 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 IL17RCQ8NAC3 791 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 TXNDC5Q8NBS9 432 aaKnown RBP14.06□□□□□ -0.16
CPSF4-210ENST00000469897 TCEAL3Q969E4 200 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 NACA2Q9H009 215 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 CSNK1G1Q9HCP0 422 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 ARHGEF4Q9NR80 690 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 VPS45Q9NRW7 570 aa14.06□□□□□ -0.16
CPSF4-210ENST00000469897 CACNA1AO00555 2505 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms