RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 ATG2BQ96BY7 2078 aa20.55■□□□□ 0.88
USP40-207ENST00000450940 MYO16Q9Y6X6 1858 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 K7ESF4 209 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 TRIM21P19474 475 aaKnown RBP20.54■□□□□ 0.88
USP40-207ENST00000450940 MXI1P50539 228 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 TUBP50607 506 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 TTC39CQ8N584 583 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 RUBCNQ92622 972 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 MMRN2Q9H8L6 949 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.54■□□□□ 0.88
USP40-207ENST00000450940 FAM49BQ9NUQ9 324 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 RAB20Q9NX57 234 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 CHORDC1Q9UHD1 332 aaPredicted RBP20.54■□□□□ 0.88
USP40-207ENST00000450940 CPQQ9Y646 472 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 KIAA1549LQ6ZVL6 1849 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 GPR179Q6PRD1 2367 aa20.54■□□□□ 0.88
USP40-207ENST00000450940 HHLA1C9JL84 531 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 ABL1P00519 1130 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 DRD1P21728 446 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 IFRD2Q12894 506 aaPredicted RBP20.53■□□□□ 0.88
USP40-207ENST00000450940 NR1H3Q13133 447 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 DDX42Q86XP3 938 aaKnown RBP eCLIP20.53■□□□□ 0.88
USP40-207ENST00000450940 ADGRG2Q8IZP9 1017 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 EXOC4Q96A65 974 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 CYFIP2Q96F07 1278 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 DHTKD1Q96HY7 919 aaPredicted RBP20.53■□□□□ 0.88
USP40-207ENST00000450940 P2RY13Q9BPV8 354 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 FBXO44Q9H4M3 255 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 PNPLA8Q9NP80 782 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 C2orf42Q9NWW7 574 aa20.53■□□□□ 0.88
USP40-207ENST00000450940 CHURC1-FNTBB4DL54 471 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 COCHO43405 550 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 NFATC1O95644 943 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 FAM200BP0CF97 657 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 PPP1R2P41236 205 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 MAP3K7CLP57077 242 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 FBXO43Q4G163 708 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 HECTD3Q5T447 861 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 FOXR2Q6PJQ5 311 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 CLEC20AQ6ZU45 233 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 ZFRQ96KR1 1074 aaKnown RBP20.52■□□□□ 0.88
USP40-207ENST00000450940 DUSP9Q99956 384 aaKnown RBP20.52■□□□□ 0.88
USP40-207ENST00000450940 DNAI2Q9GZS0 605 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 MAN1B1Q9UKM7 699 aa20.52■□□□□ 0.88
USP40-207ENST00000450940 MYOFQ9NZM1 2061 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 TRIM49BA6NDI0 452 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 SLC9A3R1O14745 358 aaPredicted RBP20.51■□□□□ 0.87
USP40-207ENST00000450940 PSMA7O14818 248 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 GADD45BO75293 160 aaPredicted RBP20.51■□□□□ 0.87
USP40-207ENST00000450940 EGFP01133 1207 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 CD44P16070 742 aaKnown RBP20.51■□□□□ 0.87
USP40-207ENST00000450940 CD58P19256 250 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 BMP6P22004 513 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 ADORA2BP29275 332 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 GAB4Q2WGN9 574 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 CBWD6Q4V339 395 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 CBWD3Q5JTY5 395 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 CBWD5Q5RIA9 395 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 NAIF1Q69YI7 327 aaPredicted RBP20.51■□□□□ 0.87
USP40-207ENST00000450940 PKN3Q6P5Z2 889 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 TTC16Q8NEE8 873 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 EZH1Q92800 747 aaPredicted RBP20.51■□□□□ 0.87
USP40-207ENST00000450940 CD101Q93033 1021 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 SLC35C1Q96A29 364 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 SMPD4Q9NXE4 827 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 GMIPQ9P107 970 aa20.51■□□□□ 0.87
USP40-207ENST00000450940 ARMCX3Q9UH62 379 aaPredicted RBP20.51■□□□□ 0.87
USP40-207ENST00000450940 E2F8A0AVK6 867 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 ATG13O75143 517 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 MBL2P11226 248 aaPredicted RBP20.5■□□□□ 0.87
USP40-207ENST00000450940 PGFP49763 221 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 STIM1Q13586 685 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 FILIP1Q7Z7B0 1213 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 TATDN2Q93075 761 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 CEP63Q96MT8 703 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 CCSER2Q9H7U1 834 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 CISHQ9NSE2 258 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 CFAP97Q9P2B7 532 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 SCML2Q9UQR0 700 aa20.5■□□□□ 0.87
USP40-207ENST00000450940 PPP1R3GB7ZBB8 358 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 PMM2O15305 246 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 CYP17A1P05093 508 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 CNR2P34972 360 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 OPRD1P41143 372 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 DMWDQ09019 674 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 MORC3Q14149 939 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 PPP1R26Q5T8A7 1209 aaPredicted RBP20.49■□□□□ 0.87
USP40-207ENST00000450940 TCERG1LQ5VWI1 586 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 GPRIN1Q7Z2K8 1008 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 LONP2Q86WA8 852 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 SLC4A11Q8NBS3 891 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 OTUB2Q96DC9 234 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 DUSP16Q9BY84 665 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 METTL14Q9HCE5 456 aaKnown RBP20.49■□□□□ 0.87
USP40-207ENST00000450940 TLR8Q9NR97 1041 aaKnown RBP20.49■□□□□ 0.87
USP40-207ENST00000450940 TBC1D14Q9P2M4 693 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 SMG5Q9UPR3 1016 aaKnown RBP20.49■□□□□ 0.87
USP40-207ENST00000450940 DMXL1Q9Y485 3027 aa20.49■□□□□ 0.87
USP40-207ENST00000450940 RNF40O75150 1001 aa20.48■□□□□ 0.87
USP40-207ENST00000450940 FNTBP49356 437 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms