RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 KDM3AQ9Y4C1 1321 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 LINC00854A0A1B0GVQ3 168 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 C7orf72A4D263 438 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GOLGA8BA8MQT2 603 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 FADS2P1A8MWK0 482 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 WASH4PA8MWX3 477 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 CENPBD1B2RD01 187 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 RASA4BC9J798 803 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SPECC1L-ADORA2AF8WAN1 911 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GOLGA8MH3BSY2 632 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZNF561-AS1K7EIQ3 104 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PLSCR1O15162 318 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 RASA4O43374 803 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 NDUFA2O43678 99 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SNX2O60749 519 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 HSF2BPO75031 334 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 HIP1RO75146 1068 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 H2AFYO75367 372 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 BAIAP3O94812 1187 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 FARP2O94887 1054 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 LARGE1O95461 756 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 AMY2AP04746 511 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 CHGBP05060 677 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 LYNP07948 512 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ABCB1P08183 1280 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SYPP08247 313 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 MYBP10242 640 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 CHRNB1P11230 501 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 COL6A1P12109 1028 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SCG2P13521 617 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GLULP15104 373 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PHKG2P15735 406 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PDE6AP16499 860 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GM2AP17900 193 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SLC9A1P19634 815 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 AMY2BP19961 511 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 KCNA3P22001 575 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATP5DP30049 168 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 MAN1A1P33908 653 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 VHLP40337 213 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 BCL6P41182 706 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TSPAN7P41732 249 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 HTR3AP46098 478 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 NEK3P51956 506 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 HNRNPFP52597 415 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GTF2A2P52657 109 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ARFIP2P53365 341 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 AK2P54819 239 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GP2P55259 537 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SCAND1P57086 179 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 JAM2P57087 298 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PCBP3P57721 371 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GJA9P57773 515 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 DSTNP60981 165 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATP6V0D1P61421 351 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 KCNJ2P63252 427 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GBE1Q04446 702 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 CDK18Q07002 472 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZBTB17Q13105 803 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PICALMQ13492 652 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TRIM29Q14134 588 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TNIP1Q15025 636 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PPP2R5BQ15173 497 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 MAPRE2Q15555 327 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TGFBIQ15582 683 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GPR19Q15760 415 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PHKG1Q16816 387 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 C15orf59Q2T9L4 293 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 DPCR1Q3MIW9 517 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 HABP4Q5JVS0 413 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 C10orf62Q5T681 223 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 LCE1DQ5T752 114 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ANGEL2Q5VTE6 544 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 RESP18Q5W5W9 173 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SPECC1LQ69YQ0 1117 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 HHIPL2Q6UWX4 724 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 B3GNT9Q6UX72 402 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 RAD9BQ6WBX8 426 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 FASTKD5Q7L8L6 764 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PTF1AQ7RTS3 328 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 APTXQ7Z2E3 356 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TRPM8Q7Z2W7 1104 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 KRT28Q7Z3Y7 464 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 PATL1Q86TB9 770 aaKnown RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SPATA24Q86W54 205 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 MAP7D3Q8IWC1 876 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 NELFCDQ8IXH7 590 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 SLC35F6Q8N357 371 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 AADATQ8N5Z0 425 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 LZTR1Q8N653 840 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ATP6V0D2Q8N8Y2 350 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 ZNF610Q8N9Z0 462 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TOR1AIP2Q8NFQ8 470 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 GSDMBQ8TAX9 411 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 BRSK1Q8TDC3 778 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 RAPGEF5Q92565 580 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 DPF2Q92785 391 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 INPP5DQ92835 1189 aa3.81□□□□□ -1.8
HMGB3P8-201ENST00000449709 TLCD1Q96CP7 247 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms