RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 GALNT15Q8N3T1 639 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZNF565Q8N9K5 539 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 C7orf57Q8NEG2 295 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC22A8Q8TCC7 542 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 MAGEC3Q8TD91 643 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 RNF139Q8WU17 664 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 POF1BQ8WVV4 589 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 FERMT2Q96AC1 680 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZC3H10Q96K80 434 aaKnown RBP5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 FERD3LQ96RJ6 166 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 PRPF18Q99633 342 aaKnown RBP5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 COQ7Q99807 217 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 FSD1Q9BTV5 496 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 TRIM55Q9BYV6 548 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 API5Q9BZZ5 524 aaKnown RBP5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 KLHL25Q9H0H3 589 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 C2orf40Q9H1Z8 148 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 CAAP1Q9H8G2 361 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 LIN28AQ9H9Z2 209 aaKnown RBP5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 HPS4Q9NQG7 708 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 MIS18AQ9NYP9 233 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 RRN3Q9NYV6 651 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 WHRNQ9P202 907 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 FETUBQ9UGM5 382 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 SRRDQ9UH36 339 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 EIF2B4Q9UI10 523 aaKnown RBP5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 ST6GALNAC2Q9UJ37 374 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 RASAL2Q9UJF2 1139 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZNF180Q9UJW8 692 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 DDX19BQ9UMR2 479 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 MAP3K5Q99683 1374 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZFYVE16Q7Z3T8 1539 aa5.02□□□□□ -1.61
HMGB3P9-201ENST00000441799 ABCA8O94911 1581 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 A0A0B4J269 797 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CTAGE9A4FU28 777 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 C2orf71A6NGG8 1288 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 C16orf96A6NNT2 1141 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 GOLGA8SH3BPF8 625 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 EYA2O00167 538 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PSMD14O00487 310 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 IKBKBO14920 756 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 MTSS1O43312 755 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PEX1O43933 1283 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ACSL4O60488 711 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC22A3O75751 556 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 HSPA4LO95757 839 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PLGP00747 810 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CHRNA1P02708 482 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 RETP07949 1114 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC3A2P08195 630 aaKnown RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CYP3A4P08684 503 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 POLR2MP0CAP2 368 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CYP2C8P10632 490 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 C6P13671 934 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 AKR1B1P15121 316 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CLCN4P51793 760 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 VCPP55072 806 aaKnown RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC26A5P58743 744 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 NLRP5P59047 1200 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 GSTO1P78417 241 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CYLC2Q14093 348 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 DHX34Q14147 1143 aaKnown RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 STK38Q15208 465 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 TCEA2Q15560 299 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 MAPKAPK3Q16644 382 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 MOGQ16653 247 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ERCC6LQ2NKX8 1250 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 TM4SF20Q53R12 229 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PRR31Q5SQ13 230 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 TMTC4Q5T4D3 741 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 ARHGAP11AQ6P4F7 1023 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CCDC149Q6ZUS6 474 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 C15orf52Q6ZUT6 534 aaKnown RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 RAB11FIP2Q7L804 512 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 MAMDC2Q7Z304 686 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 STK32CQ86UX6 486 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 FAM124AQ86V42 546 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 WDR49Q8IV35 697 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PASD1Q8IV76 773 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CD302Q8IX05 232 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CADM3Q8N126 398 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 LGI4Q8N135 537 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CCDC33Q8N5R6 958 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 KYQ8NBH2 561 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 DENND6BQ8NEG7 585 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 LILRB4Q8NHJ6 448 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 PLEKHO2Q8TD55 490 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CASP10Q92851 521 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 DVL3Q92997 716 aaPredicted RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 SLC47A1Q96FL8 570 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 RPGRIP1Q96KN7 1286 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CCDC138Q96M89 665 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CMTM3Q96MX0 182 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 SECISBP2Q96T21 854 aaKnown RBP5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 TSG101Q99816 390 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 CHCHD6Q9BRQ6 235 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 KIFC3Q9BVG8 833 aa5.01□□□□□ -1.61
HMGB3P9-201ENST00000441799 MTMR12Q9C0I1 747 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms