RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 TRPV5Q9NQA5 729 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 GMIPQ9P107 970 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 CHORDC1Q9UHD1 332 aaPredicted RBP12.46□□□□□ -0.41
HSPG2-206ENST00000439717 SIK3Q9Y2K2 1263 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 FHOD1Q9Y613 1164 aa12.46□□□□□ -0.41
HSPG2-206ENST00000439717 DENND4CQ5VZ89 1909 aa12.46□□□□□ -0.42
HSPG2-206ENST00000439717 NUP210Q8TEM1 1887 aaPredicted RBP12.46□□□□□ -0.42
HSPG2-206ENST00000439717 PATJQ8NI35 1801 aa12.46□□□□□ -0.42
HSPG2-206ENST00000439717 OBSL1O75147 1896 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 C2orf78A6NCI8 922 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 M0QYV0 167 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 FOXN3O00409 490 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ZNF263O14978 683 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 CHADO15335 359 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ABL1P00519 1130 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 CFHP08603 1231 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 TCF3P15923 654 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 BPIFB4P59827 614 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 SLC7A9P82251 487 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 PLCB2Q00722 1185 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 PTK2Q05397 1052 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 RAPGEF1Q13905 1077 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 GRM2Q14416 872 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 DRAP1Q14919 205 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-206ENST00000439717 SYCP1Q15431 976 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ARHGAP29Q52LW3 1261 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 TMEM31Q5JXX7 168 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 HECTD3Q5T447 861 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 BMP8AQ7Z5Y6 402 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ARHGAP18Q8N392 663 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ZNF276Q8N554 614 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 KIAA1958Q8N8K9 716 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ARL14EPQ8N8R7 260 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-206ENST00000439717 SLC35F5Q8WV83 523 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ZNF606Q8WXB4 792 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 DNASE1L2Q92874 299 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 IRF7Q92985 503 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 RSPRY1Q96DX4 576 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 HSFY1Q96LI6 401 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 SLC22A12Q96S37 553 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 CYP2S1Q96SQ9 504 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 SMG9Q9H0W8 520 aaKnown RBP12.45□□□□□ -0.42
HSPG2-206ENST00000439717 GANQ9H2C0 597 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 LRRC4Q9HBW1 653 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 C11orf16Q9NQ32 467 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
HSPG2-206ENST00000439717 THG1LQ9NWX6 298 aaKnown RBP12.45□□□□□ -0.42
HSPG2-206ENST00000439717 AJAP1Q9UKB5 411 aaPredicted RBP12.45□□□□□ -0.42
HSPG2-206ENST00000439717 FBXL21Q9UKT6 434 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 ARHGAP26Q9UNA1 814 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 MYO10Q9HD67 2058 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 CUL9Q8IWT3 2517 aa12.45□□□□□ -0.42
HSPG2-206ENST00000439717 PRR33A8MZF0 331 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 CYP26A1O43174 497 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 THAP12O43422 761 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 ZBED1O96006 694 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 CALCAP01258 141 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 GDI1P31150 447 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 TKTL1P51854 596 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 PM20D1Q6GTS8 502 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 TADA2BQ86TJ2 420 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 LUZP1Q86V48 1076 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 GPIHBP1Q8IV16 184 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 SCML4Q8N228 414 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 NEK11Q8NG66 645 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 STK32AQ8WU08 396 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 SECISBP2LQ93073 1101 aaKnown RBP12.44□□□□□ -0.42
HSPG2-206ENST00000439717 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-206ENST00000439717 LRRC3BQ96PB8 259 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 CDK5RAP1Q96SZ6 601 aaKnown RBP12.44□□□□□ -0.42
HSPG2-206ENST00000439717 RNF38Q9H0F5 515 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 BRD9Q9H8M2 597 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 CYLDQ9NQC7 956 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 FAM207AQ9NSI2 230 aaPredicted RBP12.44□□□□□ -0.42
HSPG2-206ENST00000439717 CLIC5Q9NZA1 410 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 CCL26Q9Y258 94 aa12.44□□□□□ -0.42
HSPG2-206ENST00000439717 ZNF638Q14966 1978 aaKnown RBP12.43□□□□□ -0.42
HSPG2-206ENST00000439717 A0A1B0GTH6 734 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 F8VZ95 297 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 TULP2O00295 520 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 COCHO43405 550 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 TLR5O60602 858 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 SERPINC1P01008 464 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 RALAP11233 206 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 CLCN1P35523 988 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 GPD2P43304 727 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 RPL34P49207 117 aaKnown RBP12.43□□□□□ -0.42
HSPG2-206ENST00000439717 KLK7P49862 253 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 MLLT6P55198 1093 aaPredicted RBP12.43□□□□□ -0.42
HSPG2-206ENST00000439717 POLR2FP61218 127 aaKnown RBP12.43□□□□□ -0.42
HSPG2-206ENST00000439717 PRKCQQ04759 706 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 USP4Q13107 963 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 ZNF77Q15935 545 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 SLC44A4Q53GD3 710 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 PMF1Q6P1K2 205 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 DENND1BQ6P3S1 775 aa12.43□□□□□ -0.42
HSPG2-206ENST00000439717 KLHDC10Q6PID8 442 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms