RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 NECAB2Q7Z6G3 386 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 RCOR2Q8IZ40 523 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 KCTD13Q8WZ19 329 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 TMEM106CQ9BVX2 250 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 MTUS1Q9ULD2 1270 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 USP18Q9UMW8 372 aa23.14■■□□□ 1.3
VSX1-205ENST00000429762 ARHGEF37A1IGU5 675 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 HHLA1C9JL84 531 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 ALDH2P05091 517 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 CD48P09326 243 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 ACRP10323 421 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 KCNJ1P48048 391 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 ODF2Q5BJF6 829 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 VARS2Q5ST30 1063 aaKnown RBP23.14■■□□□ 1.29
VSX1-205ENST00000429762 SCYL2Q6P3W7 929 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 CASKIN2Q8WXE0 1202 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 SLITRK6Q9H5Y7 841 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 CHST7Q9NS84 486 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 GPATCH2LQ9NWQ4 482 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 PTPRDP23468 1912 aa23.14■■□□□ 1.29
VSX1-205ENST00000429762 GALTP07902 379 aa23.13■■□□□ 1.29
VSX1-205ENST00000429762 DEFB103AP81534 67 aa23.13■■□□□ 1.29
VSX1-205ENST00000429762 MRPS5P82675 430 aaKnown RBP23.13■■□□□ 1.29
VSX1-205ENST00000429762 CCNI2Q6ZMN8 369 aaPredicted RBP23.13■■□□□ 1.29
VSX1-205ENST00000429762 CYP4V2Q6ZWL3 525 aaPredicted RBP23.13■■□□□ 1.29
VSX1-205ENST00000429762 DEFB106AQ8N104 65 aa23.13■■□□□ 1.29
VSX1-205ENST00000429762 RBM41Q96IZ5 413 aaKnown RBP23.13■■□□□ 1.29
VSX1-205ENST00000429762 GDAP1L1Q96MZ0 367 aa23.13■■□□□ 1.29
VSX1-205ENST00000429762 COLEC11Q9BWP8 271 aa23.13■■□□□ 1.29
VSX1-205ENST00000429762 MRPL9Q9BYD2 267 aaKnown RBP23.13■■□□□ 1.29
VSX1-205ENST00000429762 DDX56Q9NY93 547 aaKnown RBP23.13■■□□□ 1.29
VSX1-205ENST00000429762 C3orf70A6NLC5 250 aaPredicted RBP23.12■■□□□ 1.29
VSX1-205ENST00000429762 TRAPPC3O43617 180 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 USP17L7P0C7H9 530 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 PITX1P78337 314 aaPredicted RBP23.12■■□□□ 1.29
VSX1-205ENST00000429762 TAS1R1Q7RTX1 841 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 DDX42Q86XP3 938 aaKnown RBP eCLIP23.12■■□□□ 1.29
VSX1-205ENST00000429762 IFT81Q8WYA0 676 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 COL4A6Q14031 1691 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 TIMP1P01033 207 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 KRT7P08729 469 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 CYP2F1P24903 491 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 CARSP49589 748 aaKnown RBP23.12■■□□□ 1.29
VSX1-205ENST00000429762 DR1Q01658 176 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 KLF1Q13351 362 aaPredicted RBP23.12■■□□□ 1.29
VSX1-205ENST00000429762 FUT10Q6P4F1 479 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 POLNQ7Z5Q5 900 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 SPATA2LQ8IUW3 424 aaPredicted RBP23.12■■□□□ 1.29
VSX1-205ENST00000429762 LRRC43Q8N309 656 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 STKLD1Q8NE28 680 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 ZBTB9Q96C00 473 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 PGLYRP2Q96PD5 576 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 TBCBQ99426 244 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 ARFGAP3Q9NP61 516 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 ABI2Q9NYB9 513 aaPredicted RBP23.12■■□□□ 1.29
VSX1-205ENST00000429762 CALCOCO1Q9P1Z2 691 aa23.12■■□□□ 1.29
VSX1-205ENST00000429762 OAZ2O95190 189 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 RAG1P15918 1043 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 PCK1P35558 622 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 CDKN2BP42772 138 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 HDAC4P56524 1084 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 ACAP1Q15027 740 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 BEND6Q5SZJ8 279 aaPredicted RBP23.11■■□□□ 1.29
VSX1-205ENST00000429762 CCDC137Q6PK04 289 aaKnown RBP23.11■■□□□ 1.29
VSX1-205ENST00000429762 CCDC26Q8TAB7 109 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 HAUS1Q96CS2 278 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 TRIM31Q9BZY9 425 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 ZCWPW1Q9H0M4 648 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 GDF3Q9NR23 364 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP23.11■■□□□ 1.29
VSX1-205ENST00000429762 LTBP2Q14767 1821 aa23.11■■□□□ 1.29
VSX1-205ENST00000429762 hCG_1818297A0A087WSY0 165 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 ERLIN1O75477 346 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 SCNN1AP37088 669 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 COILP38432 576 aaPredicted RBP23.1■■□□□ 1.29
VSX1-205ENST00000429762 PTGIRP43119 386 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 ARPP19P56211 112 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 IFRD2Q12894 506 aaPredicted RBP23.1■■□□□ 1.29
VSX1-205ENST00000429762 CTXN3Q4LDR2 81 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 EFHC1Q5JVL4 640 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 DPH5Q9H2P9 285 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 CSNK1G1Q9HCP0 422 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 SYNJ2BP-COX16A0A087WUM0 186 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 YJEFN3A6XGL0 299 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 E7ENQ6 273 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 PRPSAP2O60256 369 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 HSF2BPO75031 334 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 DAB1O75553 588 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 DGKIO75912 1065 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 KDELR1P24390 212 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 CHRNA3P32297 505 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 RFC2P35250 354 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 DAOAP59103 153 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 DYNLT1P63172 113 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 CYP1B1Q16678 543 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 RAB41Q5JT25 222 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 RTP2Q5QGT7 225 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 KCTD6Q8NC69 237 aa23.1■■□□□ 1.29
VSX1-205ENST00000429762 DDX23Q9BUQ8 820 aaKnown RBP23.1■■□□□ 1.29
VSX1-205ENST00000429762 DCLK3Q9C098 648 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms