RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 NUDCD3Q8IVD9 361 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 RCOR2Q8IZ40 523 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 RNF148Q8N7C7 305 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 CEP70Q8NHQ1 597 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 GDPD5Q8WTR4 605 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 AVENQ9NQS1 362 aaPredicted RBP14.04□□□□□ -0.16
LRCH3-203ENST00000425562 MAGEB3O15480 346 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 VAV1P15498 845 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 NELFEP18615 380 aaKnown RBP14.04□□□□□ -0.16
LRCH3-203ENST00000425562 IL1R2P27930 398 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 ETV4P43268 484 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 ACTR3P61158 418 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 TTLL12Q14166 644 aaPredicted RBP14.04□□□□□ -0.16
LRCH3-203ENST00000425562 RAB6CQ53S08 254 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 TFDP3Q5H9I0 405 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 RFX6Q8HWS3 928 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 PPIL6Q8IXY8 311 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 ABRAQ8N0Z2 381 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 NAT14Q8WUY8 206 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 TMEM143Q96AN5 459 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 APOPT1Q96IL0 206 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 RAB6CQ9H0N0 254 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 ZNRF3Q9ULT6 936 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 SH3BP1Q9Y3L3 701 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 NUB1Q9Y5A7 615 aa14.04□□□□□ -0.16
LRCH3-203ENST00000425562 TM9SF1O15321 606 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 TRPA1O75762 1119 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 TM7SF2O76062 418 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 ASNSP08243 561 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 NCF2P19878 526 aaPredicted RBP14.03□□□□□ -0.16
LRCH3-203ENST00000425562 NCKAP1LP55160 1127 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 TMED1Q13445 227 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 C1orf228Q6PIY5 440 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 UNC5BQ8IZJ1 945 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 OR5B17Q8NGF7 314 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 E2F7Q96AV8 911 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 ATG4CQ96DT6 458 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 ZNF668Q96K58 619 aaPredicted RBP14.03□□□□□ -0.16
LRCH3-203ENST00000425562 IWS1Q96ST2 819 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 GRIP2Q9C0E4 1043 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 SHOC2Q9UQ13 582 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 NR2E3Q9Y5X4 410 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 MAD1L1Q9Y6D9 718 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 CENPFP49454 3210 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 WNT10BO00744 389 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 KCNA4P22459 653 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 CDKN2BP42772 138 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 MSLNQ13421 630 aaPredicted RBP14.03□□□□□ -0.16
LRCH3-203ENST00000425562 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 MOCOSQ96EN8 888 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 FAM81BQ96LP2 452 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 PDCD2LQ9BRP1 358 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 PCDH9Q9HC56 1237 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 MAN1C1Q9NR34 630 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 PARVAQ9NVD7 372 aa14.03□□□□□ -0.16
LRCH3-203ENST00000425562 WDR64B1ANS9 1081 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 HNRNPCL1O60812 293 aaKnown RBP14.02□□□□□ -0.16
LRCH3-203ENST00000425562 RFC1P35251 1148 aaPredicted RBP14.02□□□□□ -0.16
LRCH3-203ENST00000425562 HIC1Q14526 733 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 FBXL19Q6PCT2 694 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 RBM44Q6ZP01 1051 aaKnown RBP14.02□□□□□ -0.16
LRCH3-203ENST00000425562 MYLK4Q86YV6 388 aaPredicted RBP14.02□□□□□ -0.16
LRCH3-203ENST00000425562 KCTD17Q8N5Z5 321 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 JOSD2Q8TAC2 188 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 ZNF606Q8WXB4 792 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 VTI1AQ96AJ9 217 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 RPAP3Q9H6T3 665 aaPredicted RBP14.02□□□□□ -0.16
LRCH3-203ENST00000425562 XPNPEP1Q9NQW7 623 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 IL1RAPL1Q9NZN1 696 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 TAGLN3Q9UI15 199 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 STRIP2Q9ULQ0 834 aa14.02□□□□□ -0.16
LRCH3-203ENST00000425562 IQANK1A0A1B0GTG1 560 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 ITM2AO43736 263 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 ITGBL1O95965 494 aaPredicted RBP14.02□□□□□ -0.17
LRCH3-203ENST00000425562 FAM200BP0CF97 657 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 RBP3P10745 1247 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 RAG1P15918 1043 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 PSMA2P25787 234 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 BPIFB4P59827 614 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 RPL10AP62906 217 aaKnown RBP14.02□□□□□ -0.17
LRCH3-203ENST00000425562 TMEM62Q0P6H9 643 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 MYBPC3Q14896 1274 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.02□□□□□ -0.17
LRCH3-203ENST00000425562 NDUFAF2Q8N183 169 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 GPD1LQ8N335 351 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 NETO2Q8NC67 525 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 ITFG2Q969R8 447 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 FAM192AQ9GZU8 254 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 PXMP2Q9NR77 195 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 SLC9A2Q9UBY0 812 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 IP6K2Q9UHH9 426 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 COQ4Q9Y3A0 265 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 SNCAIPQ9Y6H5 919 aa14.02□□□□□ -0.17
LRCH3-203ENST00000425562 A0A088AWK7 358 aa14.01□□□□□ -0.17
LRCH3-203ENST00000425562 BUD23O43709 281 aaKnown RBP14.01□□□□□ -0.17
LRCH3-203ENST00000425562 VNN1O95497 513 aa14.01□□□□□ -0.17
LRCH3-203ENST00000425562 VCLP18206 1134 aa14.01□□□□□ -0.17
LRCH3-203ENST00000425562 LIG4P49917 911 aa14.01□□□□□ -0.17
LRCH3-203ENST00000425562 EIF3EP60228 445 aaKnown RBP14.01□□□□□ -0.17
LRCH3-203ENST00000425562 CUL2Q13617 745 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms