RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 ZWILCHQ9H900 591 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 DDX56Q9NY93 547 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 SMARCAL1Q9NZC9 954 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 SALL4Q9UJQ4 1053 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 TSPAN16Q9UKR8 245 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 CDY1Q9Y6F8 540 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 EVPLQ92817 2033 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 TARSL2A2RTX5 802 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 PIRO00625 290 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 MICAL2O94851 1124 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 ERBB2P04626 1255 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 HNRNPA1P09651 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
LSM8-204ENST00000424702 NFKBIAP25963 317 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 MTHFRP42898 656 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 DEFB103AP81534 67 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 COG7P83436 770 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 SMAD3P84022 425 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 CLLU1OSQ5K130 101 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 DENND5BQ6ZUT9 1274 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 ATP6V0D2Q8N8Y2 350 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 WNT8BQ93098 351 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 DDX47Q9H0S4 455 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 DPH5Q9H2P9 285 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 NSUN3Q9H649 340 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
LSM8-204ENST00000424702 MRPL42Q9Y6G3 142 aaKnown RBP7.59□□□□□ -1.19
LSM8-204ENST00000424702 LRRC37A2A6NM11 1700 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 PIK3R2O00459 728 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 CES2O00748 559 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 PROSCO94903 275 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 PDGFRAP16234 1089 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ACO1P21399 889 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 ACAT1P24752 427 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 AVPR1AP37288 418 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 DR1Q01658 176 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 LMNB2Q03252 620 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 CFAP58Q5T655 872 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ARHGAP17Q68EM7 881 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 COLGALT2Q8IYK4 626 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 MMGT1Q8N4V1 131 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 KREMEN2Q8NCW0 462 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 SLC2A14Q8TDB8 520 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 POF1BQ8WVV4 589 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 SMG7Q92540 1137 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 RNF25Q96BH1 459 aaPredicted RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 CALN1Q9BXU9 219 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 GOLGA2P5Q9HBQ8 144 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 METTL5Q9NRN9 209 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 FAM114A2Q9NRY5 505 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 RBM12Q9NTZ6 932 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 MRPS23Q9Y3D9 190 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 SCN10AQ9Y5Y9 1956 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 TRAV19A0A0A6YYK7 116 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 H3BRJ5 948 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 I3L4J1 428 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 MGEA5O60502 916 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 CILPO75339 1184 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 TJP3O95049 919 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ECEL1O95672 775 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 CTSAP10619 480 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 MAGEA11P43364 429 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ASPAP45381 313 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 IFNAR2P48551 515 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 SLC11A2P49281 568 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 HARS2P49590 506 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 MRPS25P82663 173 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 C10orf120Q5SQS8 335 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 DENND1BQ6P3S1 775 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 RFX6Q8HWS3 928 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ACTRT1Q8TDG2 376 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 CASD1Q96PB1 797 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.58□□□□□ -1.2
LSM8-204ENST00000424702 PCSK1NQ9UHG2 260 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 L1RE1Q9UN81 338 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ZNF148Q9UQR1 794 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 SYNJ2BP-COX16A0A087WUM0 186 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 GOLGA6CA6NDK9 693 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 GOLGA6BA6NDN3 693 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 XPO1O14980 1071 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 OPA1O60313 960 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 CKMP06732 381 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 CA3P07451 260 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 GOLGA6DP0CG33 693 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 MBL2P11226 248 aaPredicted RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 KRT10P13645 584 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 DDX6P26196 483 aaKnown RBP eCLIP7.58□□□□□ -1.25e-6■□□□□ 8.4
LSM8-204ENST00000424702 TKTP29401 623 aaKnown RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 CHRNA3P32297 505 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ZNF135P52742 658 aaPredicted RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 EPHB4P54760 987 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 OXCT1P55809 520 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 SNX1Q13596 522 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 TFDP2Q14188 446 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 ZNF268Q14587 947 aaPredicted RBP7.58□□□□□ -1.2
LSM8-204ENST00000424702 CREG2Q8IUH2 290 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 NUP93Q8N1F7 819 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 KLHL23Q8NBE8 558 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 HDAC7Q8WUI4 952 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 GDAP1L1Q96MZ0 367 aa7.58□□□□□ -1.2
LSM8-204ENST00000424702 EPAS1Q99814 870 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms