RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 C15orf38-AP3S2A0A0A6YYH1 394 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 MAGEB3O15480 346 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 MTMR1Q13613 665 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 GK3PQ14409 553 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 DPH6Q7L8W6 267 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 ARPINQ7Z6K5 226 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 ICA1LQ8NDH6 482 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 SLC44A1Q8WWI5 657 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 LENG1Q96BZ8 264 aaPredicted RBP17.31■□□□□ 0.36
PKP4-204ENST00000421462 PPP1R36Q96LQ0 422 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 MFSD14AQ96MC6 490 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 COA1Q9GZY4 146 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 PPCSQ9HAB8 311 aa17.31■□□□□ 0.36
PKP4-204ENST00000421462 MRPL11Q9Y3B7 192 aaKnown RBP17.31■□□□□ 0.36
PKP4-204ENST00000421462 PIK3R2O00459 728 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 PABPC4LP0CB38 370 aaKnown RBP17.3■□□□□ 0.36
PKP4-204ENST00000421462 KCNA4P22459 653 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 TPP2P29144 1249 aaPredicted RBP17.3■□□□□ 0.36
PKP4-204ENST00000421462 STIP1P31948 543 aaKnown RBP17.3■□□□□ 0.36
PKP4-204ENST00000421462 GALK1P51570 392 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 RPL10AP62906 217 aaKnown RBP17.3■□□□□ 0.36
PKP4-204ENST00000421462 MAP3K10Q02779 954 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 STX3Q13277 289 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 ORC1Q13415 861 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 ACAP1Q15027 740 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 ENOSF1Q7L5Y1 443 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 MAP4K3Q8IVH8 894 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 KCTD6Q8NC69 237 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 GMCL1P1Q8NEA9 526 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 SLC35B2Q8TB61 432 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 SPATA18Q8TC71 538 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 NKD2Q969F2 451 aaPredicted RBP17.3■□□□□ 0.36
PKP4-204ENST00000421462 DHRS4Q9BTZ2 278 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 RAB6BQ9NRW1 208 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 DNAJC16Q9Y2G8 782 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.3■□□□□ 0.36
PKP4-204ENST00000421462 BBOX1O75936 387 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 IL1R2P27930 398 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 RFC1P35251 1148 aaPredicted RBP17.3■□□□□ 0.36
PKP4-204ENST00000421462 GMPRP36959 345 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 NCKAP1LP55160 1127 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 MMRN1Q13201 1228 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 C1orf228Q6PIY5 440 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 RIT2Q99578 217 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 CCDC106Q9BWC9 280 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 INPP5FQ9Y2H2 1132 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 RPS6KL1Q9Y6S9 549 aa17.3■□□□□ 0.36
PKP4-204ENST00000421462 A0A0B4J269 797 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 H7C0C1 242 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 ITM2AO43736 263 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 ADCY3O60266 1144 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 FKBP6O75344 327 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 PMLP29590 882 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 HSPA1LP34931 641 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 ATP5OP48047 213 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 CHN2P52757 468 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 MRPS5P82675 430 aaKnown RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 DPYSL3Q14195 570 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 CCDC142Q17RM4 750 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 DPY19L2Q6NUT2 758 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 ZNF677Q86XU0 584 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 MIS12Q9H081 205 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 TMOD2Q9NZR1 351 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 CNTN3Q9P232 1028 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 CCPG1Q9ULG6 757 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 PLLPQ9Y342 182 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 PCNTO95613 3336 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 PPEF1O14829 653 aaPredicted RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 KRT37O76014 449 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 CLPTM1O96005 669 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 CCNIQ14094 377 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 GALNT4Q8N4A0 578 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 RNF148Q8N7C7 305 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 IL1RAPL1Q9NZN1 696 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 HBS1LQ9Y450 684 aaKnown RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 TCP10L2B9ZVM9 353 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 DHX15O43143 795 aaKnown RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 ATP6V1G1O75348 118 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 HNRNPCP07910 306 aaKnown RBP eCLIP17.29■□□□□ 0.363e-11■□□□□ 10.3
PKP4-204ENST00000421462 CD19P15391 556 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 ACO1P21399 889 aaKnown RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 TMCO4Q5TGY1 634 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 TTC39BQ5VTQ0 682 aaPredicted RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 GPAT2Q6NUI2 795 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 DRICH1Q6PGQ1 229 aaPredicted RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 OR5B17Q8NGF7 314 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 JOSD2Q8TAC2 188 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 NCSTNQ92542 709 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 MAN1C1Q9NR34 630 aa17.29■□□□□ 0.36
PKP4-204ENST00000421462 ZC3H7BQ9UGR2 993 aaKnown RBP17.29■□□□□ 0.36
PKP4-204ENST00000421462 STAM2O75886 525 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 VNN1O95497 513 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 APRTP07741 180 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 SNRPAP09012 282 aaKnown RBP17.28■□□□□ 0.36
PKP4-204ENST00000421462 TKFCQ3LXA3 575 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 SLC26A11Q86WA9 606 aa17.28■□□□□ 0.36
PKP4-204ENST00000421462 PHF13Q86YI8 300 aaPredicted RBP17.28■□□□□ 0.36
PKP4-204ENST00000421462 PRPF18Q99633 342 aaKnown RBP17.28■□□□□ 0.36
PKP4-204ENST00000421462 XAB2Q9HCS7 855 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms