RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, human

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-206	ENST00000413574	ZNF197	O14709	1029 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	PLEK	P08567	350 aa	Predicted RBP	32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	PUS10	Q3MIT2	529 aa	Known RBP	32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	OR8K1	Q8NGG5	319 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	CPA5	Q8WXQ8	436 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	HSFY1	Q96LI6	401 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	CPXM1	Q96SM3	734 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	DNAJC7	Q99615	494 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	SLC4A5	Q9BY07	1137 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	FBXO44	Q9H4M3	255 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	ABHD10	Q9NUJ1	306 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	GMIP	Q9P107	970 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	VCAN	P13611	3396 aa		32.21	■■■□□ 2.75
CSNK1E-206	ENST00000413574	AKR1B15	C9JRZ8	316 aa	Predicted RBP	32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	CDH5	P33151	784 aa	Predicted RBP	32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	NOMO3	P69849	1222 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	MRPS5	P82675	430 aa	Known RBP	32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	AAK1	Q2M2I8	961 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	NAA35	Q5VZE5	725 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	SPC24	Q8NBT2	197 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	TMEM35B	Q8NCS4	154 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	STK32A	Q8WU08	396 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	SLITRK1	Q96PX8	696 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	COMMD8	Q9NX08	183 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	SCML2	Q9UQR0	700 aa		32.2	■■■□□ 2.75
CSNK1E-206	ENST00000413574	CDC25B	P30305	580 aa		32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CDC25C	P30307	473 aa		32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	RPL34	P49207	117 aa	Known RBP	32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TDRD12	Q587J7	1177 aa	Known RBP	32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	WDR59	Q6PJI9	974 aa		32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	SIX6OS1	Q8N1H7	587 aa		32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CLEC4C	Q8WTT0	213 aa		32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ATXN2L	Q8WWM7	1075 aa	Known RBP	32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	FGF13	Q92913	245 aa		32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574	MYADM	Q96S97	322 aa		32.19	■■■□□ 2.74
CSNK1E-206	ENST00000413574		E5RJQ4	531 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ABL1	P00519	1130 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CYP1A1	P04798	512 aa	Predicted RBP	32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ARID5B	Q14865	1188 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	PTPN20	Q4JDL3	420 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	SCUBE3	Q8IX30	993 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	PPP1R13B	Q96KQ4	1090 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	GCNA	Q96QF7	691 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	MIS12	Q9H081	205 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	FGF19	O95750	216 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	LSM8	O95777	96 aa	Known RBP	32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ZBED1	O96006	694 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	SERPING1	P05155	500 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TNFAIP3	P21580	790 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	HNRNPH3	P31942	346 aa	Known RBP	32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CNGA4	Q8IV77	575 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	NPAS3	Q8IXF0	933 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TC2N	Q8N9U0	490 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	SLC30A5	Q8TAD4	765 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	MCRS1	Q96EZ8	462 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ZSWIM3	Q96MP5	696 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	PHF7	Q9BWX1	381 aa	Predicted RBP	32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TRPM5	Q9NZQ8	1165 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	FAM50B	Q9Y247	325 aa		32.18	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ZNF840P	A6NDX5	716 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	GBP2	P32456	591 aa	Predicted RBP	32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	C2CD6	Q53TS8	623 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TXNDC8	Q6A555	127 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CCDC186	Q7Z3E2	898 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TMEM110	Q86TL2	294 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	RPGRIP1	Q96KN7	1286 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ASB2	Q96Q27	587 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	NMUR1	Q9HB89	426 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ARHGAP20	Q9P2F6	1191 aa		32.17	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ERBB2	P04626	1255 aa		32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574	UNG	P13051	313 aa	Predicted RBP	32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CLEC16A	Q2KHT3	1053 aa		32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574	PM20D1	Q6GTS8	502 aa		32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574	BHLHA9	Q7RTU4	235 aa		32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ST13P5	Q8NFI4	369 aa	Predicted RBP	32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574	NOX5	Q96PH1	765 aa		32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574	OSER1	Q9NX31	292 aa		32.16	■■■□□ 2.74
CSNK1E-206	ENST00000413574		A0A1W2PQH9	124 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	C2orf78	A6NCI8	922 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	GPR158	Q5T848	1215 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TRIM72	Q6ZMU5	477 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	SCD5	Q86SK9	330 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	MRPS31	Q92665	395 aa	Known RBP	32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	SLITRK6	Q9H5Y7	841 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TRPC7	Q9HCX4	862 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CDH7	Q9ULB5	785 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	PAPSS1	O43252	624 aa	Predicted RBP	32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ZDHHC11B	P0C7U3	371 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	ACADSB	P45954	432 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	DAOA	P59103	153 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	GSE1	Q14687	1217 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	MAB21L3	Q8N8X9	362 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	PDZD8	Q8NEN9	1154 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	OVCA2	Q8WZ82	227 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	CNGB3	Q9NQW8	809 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	TAS2R14	Q9NYV8	317 aa		32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	BZW2	Q9Y6E2	419 aa	Known RBP	32.15	■■■□□ 2.74
CSNK1E-206	ENST00000413574	YJEFN3	A6XGL0	299 aa		32.14	■■■□□ 2.74
CSNK1E-206	ENST00000413574		E7ENQ6	273 aa		32.14	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms