RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GPD1P21695 349 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 KCNA3P22001 575 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 RFC5P40937 340 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 PLEKHG4Q58EX7 1191 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 WLSQ5T9L3 541 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 RSPH3Q86UC2 560 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 ARFGAP1Q8N6T3 406 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 EFCAB3Q8N7B9 438 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 C1orf127Q8N9H9 656 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 MIEF2Q96C03 454 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 TMEM176AQ96HP8 235 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 THTPAQ9BU02 230 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 RNPEPQ9H4A4 650 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 DENND2DQ9H6A0 471 aaPredicted RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 STARD13Q9Y3M8 1113 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 LOC100653049A0A140TA62 436 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 KRT34O76011 436 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 KRT37O76014 449 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 GMPRP36959 345 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 GRIA1P42261 906 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 THOC5Q13769 683 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 KPNB1Q14974 876 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 TSNAXIP1Q2TAA8 658 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 AGGF1Q8N302 714 aaeCLIP13.19□□□□□ -0.31e-6■■■□□ 16.5
PPP4R1-202ENST00000400555 ZNF570Q96NI8 536 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 PGLYRP2Q96PD5 576 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 C10orf71Q711Q0 1435 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 ZWINTO95229 277 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 PGM1P36871 562 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 VGLL4Q14135 290 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 GALNTL6Q49A17 601 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 CAPRIN2Q6IMN6 1127 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 LMNTD2Q8IXW0 634 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 CLMNQ96JQ2 1002 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 CLPTM1LQ96KA5 538 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 SPATC1LQ9H0A9 340 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 SLC24A2Q9UI40 661 aa13.19□□□□□ -0.3
PPP4R1-202ENST00000400555 PDE4DIPQ5VU43 2346 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 MEI4A8MW99 385 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 KRT36O76013 467 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 P4HA1P13674 534 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 INSRRP14616 1297 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 ASPAP45381 313 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 GTF2A2P52657 109 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 RTP1P59025 263 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 POU5F2Q8N7G0 328 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 ANKLE1Q8NAG6 615 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 SRPK1Q96SB4 655 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 DRG1Q9Y295 367 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 ANKRD31Q8N7Z5 1873 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 CXorf49A8MYA2 514 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 ADM5C9JUS6 153 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 NFKBIEO00221 500 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 CAPN9O14815 690 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 IRF6O14896 467 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 MAFO75444 373 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 LSM8O95777 96 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 OAS1P00973 400 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 HOXC6P09630 235 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 NCF2P19878 526 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 OSBPP22059 807 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 SERPINB4P48594 390 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 TFDP2Q14188 446 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 TMEM132DQ14C87 1099 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 CA9Q16790 459 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 LGSNQ5TDP6 509 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 METTL7BQ6UX53 244 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 DENND5BQ6ZUT9 1274 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 FAM183BPQ6ZVS7 135 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 BBS12Q6ZW61 710 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 BZW1Q7L1Q6 419 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 CLNKQ7Z7G1 428 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 FAM131BQ86XD5 332 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 XYLT1Q86Y38 959 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 SMC1BQ8NDV3 1235 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 NAF1Q96HR8 494 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 FOXP3Q9BZS1 431 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 KLC2Q9H0B6 622 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 VPS11Q9H270 941 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 APOL1O14791 398 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 TAP1Q03518 808 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 AP1B1Q10567 949 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 NME3Q13232 169 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 TRMT10BQ6PF06 316 aaKnown RBP13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 ZPBP2Q6X784 338 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 POLNQ7Z5Q5 900 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 TTC16Q8NEE8 873 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 ACSS3Q9H6R3 686 aa13.18□□□□□ -0.3
PPP4R1-202ENST00000400555 RSAD1Q9HA92 442 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms