RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 ATRXP46100 2492 aa14.67□□□□□ -0.06
CXCL12-202ENST00000374426 DMXL2Q8TDJ6 3036 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 A8MXQ7 604 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 COCHO43405 550 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 ADAM23O75077 832 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 ALDH1A2O94788 518 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 STAU1O95793 577 aaKnown RBP14.66□□□□□ -0.06
CXCL12-202ENST00000374426 ADH1CP00326 375 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 APODP05090 189 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 PROS1P07225 676 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 ADH5P11766 374 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 GRIA2P42262 883 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 KDSRQ06136 332 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 EHHADHQ08426 723 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 ZNF252P-AS1Q0IIN9 211 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 STK38Q15208 465 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 LY6G5CQ5SRR4 150 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 DDX42Q86XP3 938 aaKnown RBP eCLIP14.66□□□□□ -0.06
CXCL12-202ENST00000374426 NELFCDQ8IXH7 590 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 NUP93Q8N1F7 819 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 PHTF2Q8N3S3 785 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 XXYLT1Q8NBI6 393 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 WHAMMQ8TF30 809 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 SCFD1Q8WVM8 642 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 PIGKQ92643 395 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 DHX58Q96C10 678 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 INTS4Q96HW7 963 aaKnown RBP14.66□□□□□ -0.06
CXCL12-202ENST00000374426 KCNK16Q96T55 309 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 ZSCAN16Q9H4T2 348 aaPredicted RBP14.66□□□□□ -0.06
CXCL12-202ENST00000374426 ARHGEF4Q9NR80 690 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 TBC1D14Q9P2M4 693 aa14.66□□□□□ -0.06
CXCL12-202ENST00000374426 NXF1Q9UBU9 619 aaKnown RBP14.66□□□□□ -0.06
CXCL12-202ENST00000374426 DSPP15924 2871 aaKnown RBP14.66□□□□□ -0.06
CXCL12-202ENST00000374426 PI4KAP42356 2102 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 E2F8A0AVK6 867 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 C1QTNF9BB2RNN3 333 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 SPTLC2O15270 562 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 C1QTNF9P0C862 333 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 CEACAM1P13688 526 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 CSRP1P21291 193 aaKnown RBP14.65□□□□□ -0.06
CXCL12-202ENST00000374426 YWHAQP27348 245 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 PTGER3P43115 390 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 AMPD3Q01432 767 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 MAP7D1Q3KQU3 841 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 EOGTQ5NDL2 527 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 LPCAT2Q7L5N7 544 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 ETFBKMTQ8IXQ9 262 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 PDZD8Q8NEN9 1154 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 SCAMP5Q8TAC9 235 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 OVCA2Q8WZ82 227 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 FBXO32Q969P5 355 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 C7orf25Q9BPX7 421 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 POLMQ9NP87 494 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-202ENST00000374426 TMEM74BQ9NUR3 256 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 CHORDC1Q9UHD1 332 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-202ENST00000374426 EVLQ9UI08 416 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-202ENST00000374426 MBD1Q9UIS9 605 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-202ENST00000374426 CIZ1Q9ULV3 898 aaPredicted RBP14.65□□□□□ -0.06
CXCL12-202ENST00000374426 UBE4BO95155 1302 aa14.65□□□□□ -0.06
CXCL12-202ENST00000374426 FREM2Q5SZK8 3169 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 PCNX2A6NKB5 2137 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.64□□□□□ -0.07
CXCL12-202ENST00000374426 TNFRSF10BO14763 440 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 STX6O43752 255 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 PPP6R2O75170 966 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 RTN3O95197 1032 aaPredicted RBP14.64□□□□□ -0.07
CXCL12-202ENST00000374426 SPINK2P20155 84 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 CASP1P29466 404 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 ATICP31939 592 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 TNFRSF4P43489 277 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 CASP4P49662 377 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 CDH8P55286 799 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 SNRPFP62306 86 aaKnown RBP14.64□□□□□ -0.07
CXCL12-202ENST00000374426 FOXC1Q12948 553 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 TRPC3Q13507 836 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 TRIM61Q5EBN2 209 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 SNX30Q5VWJ9 437 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 SHC4Q6S5L8 630 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 UNQ6494/PRO21346Q6UXR6 183 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 PAQR9Q6ZVX9 377 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 ARMCX6Q7L4S7 300 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 FAM35AQ86V20 835 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 TMEFF1Q8IYR6 380 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 IQUBQ8NA54 791 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 PLEKHO2Q8TD55 490 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 HMGB4Q8WW32 186 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 SYAP1Q96A49 352 aaPredicted RBP14.64□□□□□ -0.07
CXCL12-202ENST00000374426 OTUB2Q96DC9 234 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 SPACA7Q96KW9 195 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 SMYD3Q9H7B4 428 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 CCSER2Q9H7U1 834 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 VRTNQ9H8Y1 702 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 FOXD4L1Q9NU39 408 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 IL37Q9NZH6 218 aa14.64□□□□□ -0.07
CXCL12-202ENST00000374426 BCCIPQ9P287 314 aaKnown RBP eCLIP14.64□□□□□ -0.07
CXCL12-202ENST00000374426 TFIP11Q9UBB9 837 aaKnown RBP14.64□□□□□ -0.07
CXCL12-202ENST00000374426 TCRBV21S2A2A0A5A6 115 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 FAM92AA1XBS5 289 aa14.63□□□□□ -0.07
CXCL12-202ENST00000374426 HOXC11O43248 304 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms