RNA–Protein interactions for RNA: ENST00000373019.4

SF3A3-201, Transcript of splicing factor 3a subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A3, Length 3,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-201ENST00000373019 CBWD3Q5JTY5 395 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CBWD5Q5RIA9 395 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 GET4Q7L5D6 327 aaPredicted RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 LILRA2Q8N149 483 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CCDC89Q8N998 374 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ETNPPLQ8TBG4 499 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 RAB3IL1Q8TBN0 382 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 TTC17Q96AE7 1141 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 BRIP1Q9BX63 1249 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 C6orf203Q9P0P8 240 aaPredicted RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 LRP2BPQ9P2M1 347 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 PCDHB2Q9Y5E7 798 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 TAF1LQ8IZX4 1826 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ASTN2O75129 1339 aaPredicted RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 DENND3A2RUS2 1198 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 SDR42E2A6NKP2 422 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 XPO1O14980 1071 aaKnown RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ALOX15BO15296 676 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 SIN3BO75182 1162 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 LRRN2O75325 713 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CAPNS1P04632 268 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CHRNA5P30532 468 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 AQP5P55064 265 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 KCNA1Q09470 495 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ARHGAP44Q17R89 818 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CENPUQ71F23 418 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ANKMY2Q8IV38 441 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ARID3BQ8IVW6 561 aaPredicted RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CHERPQ8IWX8 916 aaKnown RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 BBOF1Q8ND07 529 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 PNMA1Q8ND90 353 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF564Q8TBZ8 553 aaPredicted RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ATP2A3Q93084 1043 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 BHMTQ93088 406 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 IKZF4Q9H2S9 585 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 BCAS3Q9H6U6 928 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CLK4Q9HAZ1 481 aaKnown RBP9.93□□□□□ -0.82
SF3A3-201ENST00000373019 XPNPEP1Q9NQW7 623 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 GPRC5DQ9NZD1 345 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 RIMS3Q9UJD0 308 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CDC14AQ9UNH5 594 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CLUHO75153 1309 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 MAST2Q6P0Q8 1798 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 J3QRK9 145 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 GRM4Q14833 912 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 TBCCQ15814 346 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 FAAH2Q6GMR7 532 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CADM3Q8N126 398 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 DCAKDQ8WVC6 231 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 FBXL8Q96CD0 374 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 MXD3Q9BW11 206 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 OLFML3Q9NRN5 406 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ERGIC3Q9Y282 383 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 SQORQ9Y6N5 450 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 CACNA1SQ13698 1873 aa9.93□□□□□ -0.82
SF3A3-201ENST00000373019 ROBO3Q96MS0 1386 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 TOGARAM1Q9Y4F4 1720 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 A0A0B4J269 797 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PDXKO00764 312 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 CLIC2O15247 247 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 RSL1D1O76021 490 aaKnown RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 NR3C1P04150 777 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 TRIM28Q13263 835 aaKnown RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 TUBB3Q13509 450 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 SHROOM1Q2M3G4 852 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 USP43Q70EL4 1123 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 TRPC4APQ8TEL6 797 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 SERAC1Q96JX3 654 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 EGLN2Q96KS0 407 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 CEP295NLQ96MC4 621 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 SH3GL1Q99961 368 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 FOXP3Q9BZS1 431 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 UNKQ9C0B0 810 aaKnown RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 HERC5Q9UII4 1024 aaKnown RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PRELID1Q9Y255 219 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PCDHB13Q9Y5F0 798 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 TLL2Q9Y6L7 1015 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 ATRNL1Q5VV63 1379 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PSME4Q14997 1843 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 A8MU76 341 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 LPXNO60711 386 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PLA2G4BP0C869 781 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 FDX1P10109 184 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 KITP10721 976 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 SLC5A1P13866 664 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 BTDP43251 543 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 NAPAP54920 295 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 IFITM2Q01629 132 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 ORC2Q13416 577 aaPredicted RBP9.92□□□□□ -0.82
SF3A3-201ENST00000373019 LRP8Q14114 963 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 TFDP1Q14186 410 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 DENND5BQ6ZUT9 1274 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF804AQ7Z570 1209 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 ZNF384Q8TF68 577 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 HAS1Q92839 578 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 C7orf26Q96N11 449 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 PAFAH2Q99487 392 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 HAUS8Q9BT25 410 aa9.92□□□□□ -0.82
SF3A3-201ENST00000373019 MECRQ9BV79 373 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms