RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SCFD1Q8WVM8 642 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 BAP1Q92560 729 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 HPS3Q969F9 1004 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 SHDQ96IW2 340 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 PGLYRP2Q96PD5 576 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 RPP25Q9BUL9 199 aaKnown RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 ST7Q9NRC1 585 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 AGPAT3Q9NRZ7 376 aa10.99□□□□□ -0.65
COL5A1-202ENST00000371820 FAM207AQ9NSI2 230 aaPredicted RBP10.99□□□□□ -0.65
COL5A1-202ENST00000371820 COL4A3Q01955 1670 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 NOTCH4Q99466 2003 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 A0A0A6YYK5 440 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-202ENST00000371820 MACROD2A1Z1Q3 448 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 H3BQF6 201 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 CCDC188H7C350 402 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 RNF40O75150 1001 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 ECI2O75521 394 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 DCNP07585 359 aaKnown RBP10.98□□□□□ -0.65
COL5A1-202ENST00000371820 OR4Q2P0C623 313 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 TNNI1P19237 187 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 EPHA5P54756 1037 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 STARD6P59095 220 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 GPC5P78333 572 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 KLHL30Q0D2K2 578 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 DUSP4Q13115 394 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 TAF12Q16514 161 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 SNRNP35Q16560 246 aaKnown RBP10.98□□□□□ -0.65
COL5A1-202ENST00000371820 PRSS36Q5K4E3 855 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 EMC10Q5UCC4 262 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 WSCD1Q658N2 575 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 C8orf74Q6P047 294 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 B4GALNT4Q76KP1 1039 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 DPH6Q7L8W6 267 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 CROCCP2Q86T23 111 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 NELFCDQ8IXH7 590 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 TMEM130Q8N3G9 435 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 MREGQ8N565 214 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 TOP6BLQ8N6T0 577 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 GLIS3Q8NEA6 775 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 PJA1Q8NG27 643 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 AENQ8WTP8 325 aaKnown RBP10.98□□□□□ -0.65
COL5A1-202ENST00000371820 ING5Q8WYH8 240 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 E2F7Q96AV8 911 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 MCRS1Q96EZ8 462 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 CAPZA3Q96KX2 299 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 NAP1L3Q99457 506 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-202ENST00000371820 MKNK1Q9BUB5 465 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 MTMR12Q9C0I1 747 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 ZCWPW1Q9H0M4 648 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 SEMA4AQ9H3S1 761 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 GDAP2Q9NXN4 497 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 ARMCX3Q9UH62 379 aaPredicted RBP10.98□□□□□ -0.65
COL5A1-202ENST00000371820 SIT1Q9Y3P8 196 aa10.98□□□□□ -0.65
COL5A1-202ENST00000371820 FANCMQ8IYD8 2048 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 ZNF292O60281 2723 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 A0A0U1RQJ8 604 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 GOLGA6CA6NDK9 693 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 LRRIQ3A6PVS8 624 aaPredicted RBP10.97□□□□□ -0.65
COL5A1-202ENST00000371820 TGFB1I1O43294 461 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 EXOC3O60645 756 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 SYF2O95926 243 aaKnown RBP10.97□□□□□ -0.65
COL5A1-202ENST00000371820 ABL1P00519 1130 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 AFPP02771 609 aaKnown RBP10.97□□□□□ -0.65
COL5A1-202ENST00000371820 GOLGA6DP0CG33 693 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 MYL4P12829 197 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 FERP16591 822 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CEBPBP17676 345 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 PCSK1P29120 753 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 HOXD13P35453 343 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 PRKCIP41743 596 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 LHX1P48742 406 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CYP2J2P51589 502 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CDR1P51861 262 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 AP3M2P53677 418 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 WNT7BP56706 349 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 FOXK2Q01167 660 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CYP27A1Q02318 531 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 KCNMA1Q12791 1236 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CUL1Q13616 776 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 PSMD6Q15008 389 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 SLC5A9Q2M3M2 681 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 MGAT5BQ3V5L5 792 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 SLC39A12Q504Y0 691 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 SPDYCQ5MJ68 293 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 MICALCLQ6ZW33 695 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CBWD2Q8IUF1 395 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 ZSWIM2Q8NEG5 633 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 OR10T2Q8NGX3 314 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CCDC26Q8TAB7 109 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 ATRIPQ8WXE1 791 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 ELSPBP1Q96BH3 223 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 LRRC45Q96CN5 670 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 BORCS6Q96GS4 357 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 GCNAQ96QF7 691 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 CGRRF1Q99675 332 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 ACBD6Q9BR61 282 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 DDX23Q9BUQ8 820 aaKnown RBP10.97□□□□□ -0.65
COL5A1-202ENST00000371820 FOXQ1Q9C009 403 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 RASSF4Q9H2L5 321 aa10.97□□□□□ -0.65
COL5A1-202ENST00000371820 FAM204AQ9H8W3 233 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms