RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 SAE1Q9UBE0 346 aaPredicted RBP9.12□□□□□ -0.95
SMARCA1-203ENST00000371123 DDTLA6NHG4 134 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 FAM155BO75949 473 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 FBXO21O94952 628 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 ZBTB7AO95365 584 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 C1QAP02745 245 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 IDO1P14902 403 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 NRLP54845 237 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 MED21Q13503 144 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 FBXO33Q7Z6M2 555 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SEPT12Q8IYM1 358 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 NME8Q8N427 588 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 CCDC124Q96CT7 223 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SLC2A11Q9BYW1 496 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SMYD2Q9NRG4 433 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SEPT10Q9P0V9 454 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SH3PXD2BA1X283 911 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 PPEF1O14829 653 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 CASQ2O14958 399 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 XPOTO43592 962 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 E2F6O75461 281 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 CRTAMO95727 393 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 CFHP08603 1231 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 ATP5DP30049 168 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 RPL5P46777 297 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 HDAC4P56524 1084 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 TFDP1Q14186 410 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SLC44A4Q53GD3 710 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 OGFRL1Q5TC84 451 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 DHRS4L2Q6PKH6 230 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF354CQ86Y25 554 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 REM2Q8IYK8 340 aaPredicted RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 ZCCHC9Q8N567 271 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 LXNQ9BS40 222 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SLC13A1Q9BZW2 595 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 PLAC1Q9HBJ0 212 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNHIT2Q9UHR6 403 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 ANGPTL2Q9UKU9 493 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SPO11Q9Y5K1 396 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 NAV1Q8NEY1 1877 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 FUOMA2VDF0 154 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 H0YIN7 160 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 PLOD2O00469 737 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 NDUFB10O96000 172 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 CYP1A2P05177 515 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 ABHD2P08910 425 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 INHBBP09529 407 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 CRKP46108 304 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 TAS2R40P59535 323 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 KCNC4Q03721 635 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 TEX44Q53QW1 395 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 KCNT1Q5JUK3 1230 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 C6orf52Q5T4I8 152 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 OGFOD2Q6N063 350 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 IYDQ6PHW0 289 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 PADI6Q6TGC4 694 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 C7orf31Q8N865 590 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 KREMEN1Q96MU8 473 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 TSPAN18Q96SJ8 248 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 TMEM117Q9H0C3 514 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 QTRT2Q9H974 415 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 GPAMQ9HCL2 828 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 DNAJB4Q9UDY4 337 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 EBF1Q9UH73 591 aa9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 FNDC3AQ9Y2H6 1198 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 FAM32AQ9Y421 112 aaKnown RBP9.11□□□□□ -0.95
SMARCA1-203ENST00000371123 SF3B1O75533 1304 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 MIF4GDA9UHW6 222 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 DENRO43583 198 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 CSPG5O95196 566 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 GGPS1O95749 300 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 NSFP46459 744 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 LIG4P49917 911 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 PPP3CAQ08209 521 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 HPS6Q86YV9 775 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 PALM2Q8IXS6 379 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 EPS8L1Q8TE68 723 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 RSPH1Q8WYR4 309 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 LZICQ8WZA0 190 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 DDX1Q92499 740 aaKnown RBP9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 TTC25Q96NG3 672 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 TSSK1BQ9BXA7 367 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ZNF341Q9BYN7 854 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 IMPG2Q9BZV3 1241 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 WNT8AQ9H1J5 351 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 SMYD3Q9H7B4 428 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 CORINQ9Y5Q5 1042 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 GSRP00390 522 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ARP10275 920 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 RALAP11233 206 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 FDFT1P37268 417 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 GPC5P78333 572 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ITGA7Q13683 1181 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 MMEL1Q495T6 779 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 EFHC2Q5JST6 749 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 ARHGEF16Q5VV41 709 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 C1orf146Q5VVC0 180 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 PRR5LQ6MZQ0 368 aa9.1□□□□□ -0.95
SMARCA1-203ENST00000371123 KYAT3Q6YP21 454 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms