RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 SEPT1Q8WYJ6 367 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 KLHL4Q9C0H6 718 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PFASO15067 1338 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 BIKQ13323 160 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 RNF19BQ6ZMZ0 732 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PIGKQ92643 395 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 CLIP3Q96DZ5 547 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 FBXO10Q9UK96 956 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 MYL12BO14950 172 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 TRIM66O15016 1216 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 KPNA6O60684 536 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 BBOX1O75936 387 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 KRT35Q92764 455 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PHF11Q9UIL8 331 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 SRSF11Q05519 484 aaKnown RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 KPNB1Q14974 876 aaKnown RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 ARID3BQ8IVW6 561 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 FAM111AQ96PZ2 611 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 ACOX2Q99424 681 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 MTIF3Q9H2K0 278 aaKnown RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 SMARCAL1Q9NZC9 954 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 SNX6Q9UNH7 406 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 S100A6P06703 90 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PLA2G4FQ68DD2 849 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PPP1R10Q96QC0 940 aaKnown RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 EIF3DO15371 548 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 TXNP10599 105 aaKnown RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 ITGA4P13612 1032 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 HIRAP54198 1017 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PPP1R2P1Q96PQ5 205 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 TOR4AQ9NXH8 423 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 LOC100506127A0A0U1RQW1 187 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 EXTL3O43909 919 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 CDH16O75309 829 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PGM3O95394 542 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 S100A1P23297 94 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 MAGEA4P43358 317 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 RTKN2Q8IZC4 609 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 FAM172AQ8WUF8 416 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 OSBP2Q969R2 916 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 DCUN1D5Q9BTE7 237 aa16.92■□□□□ 0.3
PTCH1-201ENST00000331920 PAIP1Q9H074 479 aaKnown RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 DDX18Q9NVP1 670 aaKnown RBP16.92■□□□□ 0.3
PTCH1-201ENST00000331920 TTC26A0AVF1 554 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 USP27XA6NNY8 438 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 PABPC1P11940 636 aaKnown RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 PHKG2P15735 406 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 NT5DC3Q86UY8 548 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 PSIP1O75475 530 aaKnown RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 RBP5P82980 135 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 STX5Q13190 355 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 SF3B1O75533 1304 aaKnown RBP eCLIP16.91■□□□□ 0.34e-7■■■■■ 133.7
PTCH1-201ENST00000331920 NMT1P30419 496 aaKnown RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 SKIV2L2P42285 1042 aaKnown RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 PSMD4P55036 377 aaKnown RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 TTLL6Q8N841 843 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 PJA1Q8NG27 643 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 PLA2G6O60733 806 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 CLPTM1O96005 669 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 ARMCX6Q7L4S7 300 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 SSH3Q8TE77 659 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 USP13Q92995 863 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 COMMD8Q9NX08 183 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 RPS6KA5O75582 802 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 ZNF189O75820 626 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 CIAO1O76071 339 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 MED26O95402 600 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 NAA30Q147X3 362 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 MYO1HQ8N1T3 1032 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 CELF4Q9BZC1 486 aaKnown RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 CHORDC1Q9UHD1 332 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 RWDD3Q9Y3V2 267 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 TIPRLO75663 272 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 ITGA8P53708 1063 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 EID3Q8N140 333 aa16.91■□□□□ 0.3
PTCH1-201ENST00000331920 RMND5BQ96G75 393 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 MRPS7Q9Y2R9 242 aaKnown RBP16.91■□□□□ 0.3
PTCH1-201ENST00000331920 CYP20A1Q6UW02 462 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 PACS1Q6VY07 963 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 CACUL1Q86Y37 369 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 KIRREL3Q8IZU9 778 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 SCAIQ8N9R8 606 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 SLITRK1Q96PX8 696 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 UBE2OQ9C0C9 1292 aaKnown RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 PAK5Q9P286 719 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 PDS5AQ29RF7 1337 aaKnown RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 PPP1R37O75864 691 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 MAPK1P28482 360 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 HOXA7P31268 230 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 CASP4P49662 377 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 PEX5P50542 639 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 GRSF1Q12849 480 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 OXCT2Q9BYC2 517 aaPredicted RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 CNOT7Q9UIV1 285 aaKnown RBP16.9■□□□□ 0.3
PTCH1-201ENST00000331920 PSMD14O00487 310 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 HS6ST1O60243 411 aa16.9■□□□□ 0.3
PTCH1-201ENST00000331920 SEMA3DO95025 777 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms