RNA–Protein interactions for RNA: ENST00000005558.8

IFRD1-201, Transcript of interferon related developmental regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFRD1, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1-201ENST00000005558 CCDC66A2RUB6 948 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 PDGFRAP16234 1089 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 PITX1P78337 314 aaPredicted RBP20.05■□□□□ 0.8
IFRD1-201ENST00000005558 NFE2Q16621 373 aaPredicted RBP20.05■□□□□ 0.8
IFRD1-201ENST00000005558 SDHAF4Q5VUM1 108 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 BNIPLQ7Z465 357 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 PHOSPHO2Q8TCD6 241 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 TSC1Q92574 1164 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 CENPIQ92674 756 aaPredicted RBP20.05■□□□□ 0.8
IFRD1-201ENST00000005558 PEBP4Q96S96 227 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 LRRC4Q9HBW1 653 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 PNPLA8Q9NP80 782 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 NR2E1Q9Y466 385 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 INSL6Q9Y581 213 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 SLC4A7Q9Y6M7 1214 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 PLXNA3P51805 1871 aa20.05■□□□□ 0.8
IFRD1-201ENST00000005558 H7C4K7 107 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SOAT2O75908 522 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 USP17L7P0C7H9 530 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 MAGEA11P43364 429 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 ARPP19P56211 112 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SLC8A3P57103 927 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 ROR1Q01973 937 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 PSMD5Q16401 504 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 FAM109BQ6ICB4 259 aaPredicted RBP20.04■□□□□ 0.8
IFRD1-201ENST00000005558 NOA1Q8NC60 698 aaKnown RBP20.04■□□□□ 0.8
IFRD1-201ENST00000005558 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.04■□□□□ 0.8
IFRD1-201ENST00000005558 ACTRT1Q8TDG2 376 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 UBE2Q2Q8WVN8 375 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 NT5C3BQ969T7 300 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SLC2A13Q96QE2 648 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SLC9A7Q96T83 725 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 RAD9AQ99638 391 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 CNPY3Q9BT09 278 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 DDX23Q9BUQ8 820 aaKnown RBP20.04■□□□□ 0.8
IFRD1-201ENST00000005558 TTC7AQ9ULT0 858 aaPredicted RBP20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SLC27A5Q9Y2P5 690 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 CEP104O60308 925 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 ATP2A2P16615 1042 aaKnown RBP20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SNX16P57768 344 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 DDR2Q16832 855 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SYPL2Q5VXT5 272 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 SCML4Q8N228 414 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 FIBCD1Q8N539 461 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 AUTS2Q8WXX7 1259 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 DPF3Q92784 378 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 TMEM169Q96HH4 297 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 C8orf48Q96LL4 319 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 CNGB3Q9NQW8 809 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 PCDHB5Q9Y5E4 795 aa20.04■□□□□ 0.8
IFRD1-201ENST00000005558 C2CD2LO14523 706 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 MIPP30301 263 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 OR1D2P34982 312 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 GRIK1P39086 918 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 TERF1P54274 439 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 EFHC1Q5JVL4 640 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 DEFB106AQ8N104 65 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 RNPC3Q96LT9 517 aaKnown RBP20.03■□□□□ 0.8
IFRD1-201ENST00000005558 ASNSD1Q9NWL6 643 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 IL37Q9NZH6 218 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.03■□□□□ 0.8
IFRD1-201ENST00000005558 LCMT1Q9UIC8 334 aa20.03■□□□□ 0.8
IFRD1-201ENST00000005558 V9GYY5 206 aaPredicted RBP20.03■□□□□ 0.8
IFRD1-201ENST00000005558 RANBP2P49792 3224 aaKnown RBP20.02■□□□□ 0.8
IFRD1-201ENST00000005558 MYO16Q9Y6X6 1858 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 TCRBV7S2A1N4TA0A589 114 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 PSTPIP1O43586 416 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 FGF18O76093 207 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 ABLIM3O94929 683 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 FBXO21O94952 628 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 ZBED1O96006 694 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 MYOGP15173 224 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 PTPN9P43378 593 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 SLC5A3P53794 718 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 ATXN1P54253 815 aaKnown RBP20.02■□□□□ 0.8
IFRD1-201ENST00000005558 HDAC4P56524 1084 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 USP46P62068 366 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 YWHAZP63104 245 aaKnown RBP20.02■□□□□ 0.8
IFRD1-201ENST00000005558 LRRC38Q5VT99 294 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 VSTM1Q6UX27 236 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 RHOT1Q8IXI2 618 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 KATNAL2Q8IYT4 538 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 SIX6OS1Q8N1H7 587 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 CEP112Q8N8E3 955 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 SPATA4Q8NEY3 305 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 ACSF2Q96CM8 615 aaPredicted RBP20.02■□□□□ 0.8
IFRD1-201ENST00000005558 OXCT2Q9BYC2 517 aaPredicted RBP20.02■□□□□ 0.8
IFRD1-201ENST00000005558 CHD9Q3L8U1 2897 aa20.02■□□□□ 0.8
IFRD1-201ENST00000005558 C3orf70A6NLC5 250 aaPredicted RBP20.02■□□□□ 0.79
IFRD1-201ENST00000005558 GRXCR1A8MXD5 290 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 HSF2BPO75031 334 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 DAB1O75553 588 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 HAPLN1P10915 354 aaPredicted RBP20.02■□□□□ 0.79
IFRD1-201ENST00000005558 CPB1P15086 417 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 GLUD2P49448 558 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 RWDD2BP57060 319 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 DUSP4Q13115 394 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 ACAP1Q15027 740 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 VPS52Q8N1B4 723 aa20.02■□□□□ 0.79
IFRD1-201ENST00000005558 UBL4BQ8N7F7 174 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms