RNA–Protein interactions for RNA: YPL110C

GDE1, Transcript of Glycerophosphocholine (GroPCho) phosphodiesterase, yeastyeast

Gene GDE1, Length 3,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GDE1YPL110C ATP20Q12233 115 aa3.4□□□□□ -1.87
GDE1YPL110C COA3Q3E7B2 85 aa3.4□□□□□ -1.87
GDE1YPL110C MPC3P53311 146 aa3.39□□□□□ -1.87
GDE1YPL110C YPR011CQ12251 326 aa3.39□□□□□ -1.87
GDE1YPL110C YBR209WP38311 105 aa3.39□□□□□ -1.87
GDE1YPL110C RGM1Q00453 211 aa3.39□□□□□ -1.87
GDE1YPL110C SED1Q01589 338 aa3.39□□□□□ -1.87
GDE1YPL110C VPS68Q12016 184 aa3.39□□□□□ -1.87
GDE1YPL110C YPR108W-AQ3E7B3 70 aa3.38□□□□□ -1.87
GDE1YPL110C FYV12Q08559 129 aa3.38□□□□□ -1.87
GDE1YPL110C CDC39P25655 2108 aaKnown RBP3.38□□□□□ -1.87
GDE1YPL110C QCR10P37299 77 aa3.38□□□□□ -1.87
GDE1YPL110C RPL36BO14455 100 aaKnown RBP3.37□□□□□ -1.87
GDE1YPL110C RPL36AP05745 100 aaPredicted RBP3.37□□□□□ -1.87
GDE1YPL110C YMR122CQ03879 124 aa3.37□□□□□ -1.87
GDE1YPL110C YBL008W-AQ3E821 79 aa3.37□□□□□ -1.87
GDE1YPL110C UTH1P36135 365 aa3.37□□□□□ -1.87
GDE1YPL110C RPS14AP06367 137 aaKnown RBP3.37□□□□□ -1.87
GDE1YPL110C OST5Q92316 86 aa3.37□□□□□ -1.87
GDE1YPL110C YKR032WP36127 104 aa3.36□□□□□ -1.87
GDE1YPL110C YOL166W-AQ8TGJ1 51 aa3.36□□□□□ -1.87
GDE1YPL110C YLR156WP0CE96 114 aa3.36□□□□□ -1.87
GDE1YPL110C YLR159WP0CE97 114 aa3.36□□□□□ -1.87
GDE1YPL110C YLR161WP0CE98 114 aa3.36□□□□□ -1.87
GDE1YPL110C YOR192C-CQ3E736 78 aa3.36□□□□□ -1.87
GDE1YPL110C RPS14BP39516 138 aaKnown RBP3.35□□□□□ -1.87
GDE1YPL110C RPL26BP53221 127 aaKnown RBP3.35□□□□□ -1.87
GDE1YPL110C YLR194CQ05777 254 aa3.35□□□□□ -1.87
GDE1YPL110C IRC19Q07843 230 aa3.35□□□□□ -1.87
GDE1YPL110C YLR285C-AQ3E771 56 aa3.35□□□□□ -1.87
GDE1YPL110C RPS23AP0CX29 145 aaKnown RBP3.35□□□□□ -1.87
GDE1YPL110C RPS23BP0CX30 145 aa3.35□□□□□ -1.87
GDE1YPL110C YEL073CP39974 107 aa3.35□□□□□ -1.87
GDE1YPL110C YIR020CP40575 100 aa3.35□□□□□ -1.87
GDE1YPL110C TOS6P48560 102 aa3.35□□□□□ -1.87
GDE1YPL110C HUG1Q6Q5K6 68 aa3.35□□□□□ -1.87
GDE1YPL110C EDC2P40023 145 aaPredicted RBP3.34□□□□□ -1.87
GDE1YPL110C LIP1Q03579 150 aa3.34□□□□□ -1.87
GDE1YPL110C VPS13Q07878 3144 aa3.34□□□□□ -1.87
GDE1YPL110C SOM1Q05676 74 aa3.34□□□□□ -1.88
GDE1YPL110C EDC1P53080 175 aaPredicted RBP3.33□□□□□ -1.88
GDE1YPL110C MRPS12P53732 153 aa3.33□□□□□ -1.88
GDE1YPL110C YJL197C-AP0C5P0 93 aa3.33□□□□□ -1.88
GDE1YPL110C YCR022CP25620 114 aa3.33□□□□□ -1.88
GDE1YPL110C CCW14O13547 238 aa3.33□□□□□ -1.88
GDE1YPL110C FIT2Q08906 153 aa3.32□□□□□ -1.88
GDE1YPL110C YBL071CP38185 102 aa3.32□□□□□ -1.88
GDE1YPL110C RRT1P38192 103 aa3.32□□□□□ -1.88
GDE1YPL110C YPR153WQ06537 140 aa3.32□□□□□ -1.88
GDE1YPL110C SHU1P38751 150 aa3.32□□□□□ -1.88
GDE1YPL110C API2Q04413 109 aa3.31□□□□□ -1.88
GDE1YPL110C RPR2P40571 144 aa3.31□□□□□ -1.88
GDE1YPL110C NOP10Q6Q547 58 aaPredicted RBP3.31□□□□□ -1.88
GDE1YPL110C YLR111WQ12528 110 aa3.31□□□□□ -1.88
GDE1YPL110C IRC21Q04772 201 aa3.3□□□□□ -1.88
GDE1YPL110C YPL278CQ08990 100 aa3.3□□□□□ -1.88
GDE1YPL110C PRM7Q12459 698 aa3.3□□□□□ -1.88
GDE1YPL110C YAR023CD6VPM8 179 aa3.29□□□□□ -1.88
GDE1YPL110C YOR020W-AQ3E824 90 aa3.29□□□□□ -1.88
GDE1YPL110C HMRA2P0CY13 119 aa3.29□□□□□ -1.88
GDE1YPL110C REE1P40893 198 aa3.29□□□□□ -1.88
GDE1YPL110C TOM7P53507 60 aa3.29□□□□□ -1.88
GDE1YPL110C MRPS8Q03799 155 aa3.29□□□□□ -1.88
GDE1YPL110C YLR122CQ12312 125 aa3.28□□□□□ -1.88
GDE1YPL110C MRPL38P35996 138 aaPredicted RBP3.28□□□□□ -1.89
GDE1YPL110C HSP150P32478 413 aa3.27□□□□□ -1.89
GDE1YPL110C YMR321CQ04898 105 aa3.27□□□□□ -1.89
GDE1YPL110C YMR244WQ04018 355 aa3.27□□□□□ -1.89
GDE1YPL110C ATP15P21306 62 aa3.26□□□□□ -1.89
GDE1YPL110C YGL149WP53116 101 aa3.26□□□□□ -1.89
GDE1YPL110C RPS30AP0CX33 63 aaKnown RBP3.26□□□□□ -1.89
GDE1YPL110C RPS30BP0CX34 63 aaKnown RBP3.26□□□□□ -1.89
GDE1YPL110C TVP23P38962 199 aa3.26□□□□□ -1.89
GDE1YPL110C YLR236CA0A023PZG4 107 aa3.25□□□□□ -1.89
GDE1YPL110C YGL258W-AQ3E740 77 aa3.25□□□□□ -1.89
GDE1YPL110C YNL208WP40159 199 aaKnown RBP3.25□□□□□ -1.89
GDE1YPL110C MRX7P53869 86 aa3.25□□□□□ -1.89
GDE1YPL110C ARC15P40518 154 aaRIP-Chip data3.25□□□□□ -1.89not detected
GDE1YPL110C YPR013CQ12145 317 aa3.24□□□□□ -1.89
GDE1YPL110C YNL190WP53872 204 aa3.24□□□□□ -1.89
GDE1YPL110C KRE9P39005 276 aa3.24□□□□□ -1.89
GDE1YPL110C RTC6O14464 93 aa3.23□□□□□ -1.89
GDE1YPL110C HUA1P40325 198 aa3.23□□□□□ -1.89
GDE1YPL110C YIL156W-BQ2V2P4 73 aa3.23□□□□□ -1.89
GDE1YPL110C YLR342W-AQ3E810 57 aa3.23□□□□□ -1.89
GDE1YPL110C RPS11AP0CX47 156 aaKnown RBP3.22□□□□□ -1.89
GDE1YPL110C RPS11BP0CX48 156 aaKnown RBP3.22□□□□□ -1.89
GDE1YPL110C DAD4P69851 72 aa3.22□□□□□ -1.89
GDE1YPL110C YJR107C-AP0CT86 78 aa3.21□□□□□ -1.9
GDE1YPL110C COX14P39103 70 aa3.21□□□□□ -1.9
GDE1YPL110C YMR141CP40211 102 aa3.2□□□□□ -1.9
GDE1YPL110C YOR008C-AQ3E7B9 74 aa3.2□□□□□ -1.9
GDE1YPL110C COX23P38824 151 aa3.2□□□□□ -1.9
GDE1YPL110C ATP18P81450 59 aa3.2□□□□□ -1.9
GDE1YPL110C YSF3P0C074 85 aaPredicted RBP3.19□□□□□ -1.9
GDE1YPL110C YCR095W-AQ3E787 52 aa3.19□□□□□ -1.9
GDE1YPL110C YNL042W-BQ3E7Z2 85 aa3.19□□□□□ -1.9
GDE1YPL110C YOR032W-AQ8TGS1 66 aa3.19□□□□□ -1.9
GDE1YPL110C SPC1P46965 94 aa3.19□□□□□ -1.9
GDE1YPL110C YJR085CP47131 105 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms