RNA–Protein interactions for RNA: YPL002C

SNF8, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene SNF8, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF8YPL002C RPA12P32529 125 aaKnown RBP2.85□□□□□ -1.95
SNF8YPL002C YJL027CP47063 138 aaPredicted RBP2.85□□□□□ -1.95
SNF8YPL002C YLR296WQ05898 108 aa2.85□□□□□ -1.95
SNF8YPL002C POC4Q12245 148 aaPredicted RBP2.85□□□□□ -1.95
SNF8YPL002C YLR363W-AQ3E747 85 aa2.85□□□□□ -1.95
SNF8YPL002C ATP15P21306 62 aa2.84□□□□□ -1.95
SNF8YPL002C YCR025CP25352 136 aa2.84□□□□□ -1.95
SNF8YPL002C TOM6P33448 61 aa2.84□□□□□ -1.95
SNF8YPL002C YHL042WP38729 150 aa2.84□□□□□ -1.95
SNF8YPL002C VTC1P40046 129 aaRIP-Chip data2.84□□□□□ -1.95not detected
SNF8YPL002C YNL198CP40166 100 aa2.84□□□□□ -1.95
SNF8YPL002C YDL012CQ12489 107 aa2.84□□□□□ -1.95
SNF8YPL002C SCS22Q6Q595 175 aa2.84□□□□□ -1.95
SNF8YPL002C YAR023CD6VPM8 179 aa2.83□□□□□ -1.96
SNF8YPL002C YLR156WP0CE96 114 aa2.83□□□□□ -1.96
SNF8YPL002C YLR159WP0CE97 114 aa2.83□□□□□ -1.96
SNF8YPL002C YLR161WP0CE98 114 aa2.83□□□□□ -1.96
SNF8YPL002C YHR213WP0CI67 198 aa2.83□□□□□ -1.96
SNF8YPL002C MRP17P28778 131 aa2.83□□□□□ -1.96
SNF8YPL002C YKL044WP36092 106 aa2.83□□□□□ -1.96
SNF8YPL002C YNL217WP40152 326 aa2.83□□□□□ -1.96
SNF8YPL002C SPC1P46965 94 aa2.83□□□□□ -1.96
SNF8YPL002C YGR025WP53216 100 aa2.83□□□□□ -1.96
SNF8YPL002C POP3P53833 195 aaPredicted RBP2.83□□□□□ -1.96
SNF8YPL002C TIM22Q12328 207 aa2.83□□□□□ -1.96
SNF8YPL002C PAU21P0CE86 164 aa2.82□□□□□ -1.96
SNF8YPL002C PAU22P0CE87 164 aa2.82□□□□□ -1.96
SNF8YPL002C YFL067WP43537 175 aa2.82□□□□□ -1.96
SNF8YPL002C HUR1P45820 110 aa2.82□□□□□ -1.96
SNF8YPL002C YDR042CQ03205 200 aa2.82□□□□□ -1.96
SNF8YPL002C AVO2Q04749 426 aa2.82□□□□□ -1.96
SNF8YPL002C YOR385WQ08909 290 aa2.82□□□□□ -1.96
SNF8YPL002C NHP2P32495 156 aaPredicted RBP2.81□□□□□ -1.96
SNF8YPL002C YBR292CP38357 123 aa2.81□□□□□ -1.96
SNF8YPL002C ASP1P38986 381 aaPredicted RBP2.81□□□□□ -1.96
SNF8YPL002C YJL028WP47062 111 aa2.81□□□□□ -1.96
SNF8YPL002C TOM7P53507 60 aa2.81□□□□□ -1.96
SNF8YPL002C YMR295CQ03559 197 aa2.81□□□□□ -1.96
SNF8YPL002C LIP1Q03579 150 aa2.81□□□□□ -1.96
SNF8YPL002C YML079WQ03629 201 aa2.81□□□□□ -1.96
SNF8YPL002C SMT3Q12306 101 aaKnown RBP2.81□□□□□ -1.96
SNF8YPL002C YDR119W-AQ2V2P9 66 aa2.81□□□□□ -1.96
SNF8YPL002C RRT15Q3E811 62 aa2.81□□□□□ -1.96
SNF8YPL002C ARC15P40518 154 aaRIP-Chip data2.8□□□□□ -1.96not detected
SNF8YPL002C PAU15P40585 124 aa2.8□□□□□ -1.96
SNF8YPL002C IMP2P46972 177 aa2.8□□□□□ -1.96
SNF8YPL002C ATP19P81451 68 aa2.8□□□□□ -1.96
SNF8YPL002C MRPS16Q02608 121 aa2.8□□□□□ -1.96
SNF8YPL002C CCW12Q12127 133 aa2.8□□□□□ -1.96
SNF8YPL002C ATP20Q12233 115 aa2.8□□□□□ -1.96
SNF8YPL002C YIL102C-AQ2V2P5 75 aa2.8□□□□□ -1.96
SNF8YPL002C YAL063C-AQ3E791 96 aa2.8□□□□□ -1.96
SNF8YPL002C FYV5P25585 152 aa2.79□□□□□ -1.96
SNF8YPL002C MSA2P36157 363 aa2.79□□□□□ -1.96
SNF8YPL002C QCR10P37299 77 aa2.79□□□□□ -1.96
SNF8YPL002C MIC27P50945 234 aa2.79□□□□□ -1.96
SNF8YPL002C FYV12Q08559 129 aa2.79□□□□□ -1.96
SNF8YPL002C YDL157CQ12082 118 aa2.79□□□□□ -1.96
SNF8YPL002C YOR015WQ12169 119 aa2.79□□□□□ -1.96
SNF8YPL002C YMR175W-AQ3E766 64 aa2.79□□□□□ -1.96
SNF8YPL002C YGR240C-AQ3E786 66 aa2.79□□□□□ -1.96
SNF8YPL002C YFL041W-AQ3E817 63 aa2.79□□□□□ -1.96
SNF8YPL002C RTC6O14464 93 aa2.78□□□□□ -1.96
SNF8YPL002C PAU19P0CE85 124 aa2.78□□□□□ -1.96
SNF8YPL002C PAU3P25610 124 aa2.78□□□□□ -1.96
SNF8YPL002C GCV3P39726 170 aaPredicted RBP2.78□□□□□ -1.96
SNF8YPL002C RSM18P40033 138 aa2.78□□□□□ -1.96
SNF8YPL002C RRT13P40042 185 aa2.78□□□□□ -1.96
SNF8YPL002C YHR022CP38763 256 aa2.77□□□□□ -1.97
SNF8YPL002C YDR381C-AQ3E6R5 114 aa2.77□□□□□ -1.97
SNF8YPL002C YDR034C-AP0C289 58 aa2.76□□□□□ -1.97
SNF8YPL002C YER187WP40102 141 aa2.76□□□□□ -1.97
SNF8YPL002C ICY1Q04329 127 aa2.76□□□□□ -1.97
SNF8YPL002C SOM1Q05676 74 aa2.76□□□□□ -1.97
SNF8YPL002C YOR105WQ08504 108 aa2.76□□□□□ -1.97
SNF8YPL002C YOR381W-AQ3E804 55 aa2.76□□□□□ -1.97
SNF8YPL002C PAU16P35994 123 aa2.75□□□□□ -1.97
SNF8YPL002C HSP10P38910 106 aa2.75□□□□□ -1.97
SNF8YPL002C MPC3P53311 146 aa2.75□□□□□ -1.97
SNF8YPL002C HPA2Q06592 156 aa2.75□□□□□ -1.97
SNF8YPL002C YPL261CQ08976 102 aa2.75□□□□□ -1.97
SNF8YPL002C YPL038W-AQ3E7B4 63 aa2.75□□□□□ -1.97
SNF8YPL002C FZF1P32805 299 aa2.74□□□□□ -1.97
SNF8YPL002C MRPS9P38120 278 aa2.74□□□□□ -1.97
SNF8YPL002C YHL005CP38752 130 aa2.74□□□□□ -1.97
SNF8YPL002C ICS3P47034 131 aa2.74□□□□□ -1.97
SNF8YPL002C COA2Q3E823 68 aa2.73□□□□□ -1.97
SNF8YPL002C YLL066W-BQ8TGJ7 56 aa2.73□□□□□ -1.97
SNF8YPL002C YOL085CQ99345 113 aa2.73□□□□□ -1.97
SNF8YPL002C RPL26AP05743 127 aaKnown RBP2.72□□□□□ -1.97
SNF8YPL002C PAU5P43575 122 aa2.72□□□□□ -1.97
SNF8YPL002C YGL118CP53132 145 aa2.72□□□□□ -1.97
SNF8YPL002C LCL1Q02786 101 aa2.72□□□□□ -1.97
SNF8YPL002C LSM6Q06406 86 aaKnown RBP2.72□□□□□ -1.97
SNF8YPL002C YOR268CQ08734 132 aa2.72□□□□□ -1.97
SNF8YPL002C YLR146W-AQ2V2P1 62 aa2.72□□□□□ -1.97
SNF8YPL002C OST5Q92316 86 aa2.72□□□□□ -1.97
SNF8YPL002C YGR269WP40326 108 aa2.71□□□□□ -1.98
SNF8YPL002C YJR085CP47131 105 aaKnown RBP2.71□□□□□ -1.98
SNF8YPL002C YGL149WP53116 101 aa2.71□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 61.5 ms