RNA–Protein interactions for RNA: YOR388C

FDH1, Transcript of NAD(+)-dependent formate dehydrogenase, yeast

Gene FDH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FDH1	YOR388C	YER039C-A	P0CD97	72 aa		2.79	□□□□□ -1.96
FDH1	YOR388C	ATP15	P21306	62 aa		2.79	□□□□□ -1.96
FDH1	YOR388C	INO2	P26798	304 aa		2.79	□□□□□ -1.96
FDH1	YOR388C	MRPL49	P40858	161 aa	Predicted RBP	2.79	□□□□□ -1.96
FDH1	YOR388C	YHR139C-A	O13536	103 aa		2.78	□□□□□ -1.96
FDH1	YOR388C	STF1	P01098	86 aa		2.78	□□□□□ -1.96
FDH1	YOR388C	MRPL24	P36525	258 aa	Predicted RBP	2.78	□□□□□ -1.96
FDH1	YOR388C	SMP1	P38128	452 aa		2.78	□□□□□ -1.96
FDH1	YOR388C	IGD1	P43598	195 aa		2.78	□□□□□ -1.96
FDH1	YOR388C	YGR025W	P53216	100 aa		2.78	□□□□□ -1.96
FDH1	YOR388C	YOL160W	Q08321	113 aa		2.78	□□□□□ -1.96
FDH1	YOR388C	RAD6	P06104	172 aa		2.77	□□□□□ -1.97
FDH1	YOR388C	RPL18A	P0CX49	186 aa	Known RBP	2.77	□□□□□ -1.97
FDH1	YOR388C	RPL18B	P0CX50	186 aa	Known RBP	2.77	□□□□□ -1.97
FDH1	YOR388C	UBC5	P15732	148 aa		2.77	□□□□□ -1.97
FDH1	YOR388C	RPL16A	P26784	199 aa	Known RBP	2.77	□□□□□ -1.97
FDH1	YOR388C	MRPL38	P35996	138 aa	Predicted RBP	2.77	□□□□□ -1.97
FDH1	YOR388C	AIM19	P40502	157 aa		2.77	□□□□□ -1.97
FDH1	YOR388C	YIL059C	P40520	121 aa		2.77	□□□□□ -1.97
FDH1	YOR388C	YJR146W	P47174	117 aa		2.77	□□□□□ -1.97
FDH1	YOR388C	SPG4	Q04438	115 aa		2.77	□□□□□ -1.97
FDH1	YOR388C	PBP4	Q07362	185 aa	Known RBP	2.77	□□□□□ -1.97
FDH1	YOR388C	YDR029W	Q12111	104 aa		2.77	□□□□□ -1.97
FDH1	YOR388C	ECM12	O13529	151 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	YHR212W-A	P0CX91	67 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	YHL042W	P38729	150 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	KNH1	P50112	268 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	COF1	Q03048	143 aa	Known RBP	2.76	□□□□□ -1.97
FDH1	YOR388C	HOR7	Q05827	59 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	YPL038W-A	Q3E7B4	63 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	YOR008C-A	Q3E7B9	74 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	YOL085C	Q99345	113 aa		2.76	□□□□□ -1.97
FDH1	YOR388C	PBI2	P0CT04	75 aa	Known RBP	2.75	□□□□□ -1.97
FDH1	YOR388C	TOM6	P33448	61 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	YHR022C	P38763	256 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	MPC2	P38857	129 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	PEX17	P40155	199 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	POR2	P40478	281 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	DCV1	P43595	202 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	TOS8	P53147	276 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	YGR219W	P53307	113 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	YBR200W-A	Q3E755	54 aa		2.75	□□□□□ -1.97
FDH1	YOR388C	RPL2A	P0CX45	254 aa	Known RBP	2.74	□□□□□ -1.97
FDH1	YOR388C	RPL2B	P0CX46	254 aa	Known RBP	2.74	□□□□□ -1.97
FDH1	YOR388C	MSA2	P36157	363 aa		2.74	□□□□□ -1.97
FDH1	YOR388C	RRT13	P40042	185 aa		2.74	□□□□□ -1.97
FDH1	YOR388C	SHH4	Q06236	168 aa		2.74	□□□□□ -1.97
FDH1	YOR388C	YHL018W	P38744	120 aa	Predicted RBP	2.73	□□□□□ -1.97
FDH1	YOR388C	SHU1	P38751	150 aa		2.73	□□□□□ -1.97
FDH1	YOR388C	YCR050C	P25630	102 aa		2.72	□□□□□ -1.97
FDH1	YOR388C	SVP26	P38869	228 aa		2.72	□□□□□ -1.97
FDH1	YOR388C	HUR1	P45820	110 aa		2.72	□□□□□ -1.97
FDH1	YOR388C	RPL16B	P26785	198 aa	Known RBP	2.71	□□□□□ -1.98
FDH1	YOR388C	YSY6	P38374	65 aa		2.71	□□□□□ -1.98
FDH1	YOR388C	YEL008W	P40001	126 aa		2.71	□□□□□ -1.98
FDH1	YOR388C	ARC15	P40518	154 aa	RIP-Chip data	2.71	□□□□□ -1.98	not detected
FDH1	YOR388C	YLR042C	Q07990	161 aa		2.71	□□□□□ -1.98
FDH1	YOR388C	CCW12	Q12127	133 aa		2.71	□□□□□ -1.98
FDH1	YOR388C	YPR013C	Q12145	317 aa		2.71	□□□□□ -1.98
FDH1	YOR388C	YOR034C-A	Q3E735	80 aa		2.71	□□□□□ -1.98
FDH1	YOR388C	YDR246W-A	Q3E763	66 aa		2.71	□□□□□ -1.98
FDH1	YOR388C	YFR035C	P43608	114 aa		2.7	□□□□□ -1.98
FDH1	YOR388C	KEG1	P43614	200 aa		2.7	□□□□□ -1.98
FDH1	YOR388C	SBH1	P52870	82 aa		2.7	□□□□□ -1.98
FDH1	YOR388C	YGL088W	P53151	121 aa		2.7	□□□□□ -1.98
FDH1	YOR388C	EMC6	Q12431	108 aa		2.7	□□□□□ -1.98
FDH1	YOR388C	YMR175W-A	Q3E766	64 aa		2.7	□□□□□ -1.98
FDH1	YOR388C	YBR121C-A	P0C5L4	52 aa		2.69	□□□□□ -1.98
FDH1	YOR388C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
FDH1	YOR388C	PEX22	P39718	180 aa		2.69	□□□□□ -1.98
FDH1	YOR388C	ALG13	P53178	202 aa		2.69	□□□□□ -1.98
FDH1	YOR388C	RGM1	Q00453	211 aa		2.69	□□□□□ -1.98
FDH1	YOR388C	YLR236C	A0A023PZG4	107 aa		2.68	□□□□□ -1.98
FDH1	YOR388C	QCR8	P08525	94 aa		2.68	□□□□□ -1.98
FDH1	YOR388C	YBR209W	P38311	105 aa		2.68	□□□□□ -1.98
FDH1	YOR388C	YNL194C	P40169	301 aa		2.68	□□□□□ -1.98
FDH1	YOR388C	EDC1	P53080	175 aa	Predicted RBP	2.68	□□□□□ -1.98
FDH1	YOR388C	YOR011W-A	Q3E807	68 aa		2.68	□□□□□ -1.98
FDH1	YOR388C	TAR1	Q8TGM6	124 aa		2.68	□□□□□ -1.98
FDH1	YOR388C	YLR156W	P0CE96	114 aa		2.67	□□□□□ -1.98
FDH1	YOR388C	YLR159W	P0CE97	114 aa		2.67	□□□□□ -1.98
FDH1	YOR388C	YLR161W	P0CE98	114 aa		2.67	□□□□□ -1.98
FDH1	YOR388C	YBR219C	P38317	127 aa		2.67	□□□□□ -1.98
FDH1	YOR388C	ERG28	P40030	148 aa		2.67	□□□□□ -1.98
FDH1	YOR388C	IRC21	Q04772	201 aa		2.67	□□□□□ -1.98
FDH1	YOR388C	YNL146C-A	Q3E7Z1	64 aa		2.67	□□□□□ -1.98
FDH1	YOR388C	RPS28B	P0C0X0	67 aa	Known RBP	2.66	□□□□□ -1.98
FDH1	YOR388C	AUA1	P32450	94 aa		2.66	□□□□□ -1.98
FDH1	YOR388C	YER187W	P40102	141 aa		2.66	□□□□□ -1.98
FDH1	YOR388C	ATP18	P81450	59 aa		2.66	□□□□□ -1.98
FDH1	YOR388C	YMR295C	Q03559	197 aa		2.66	□□□□□ -1.98
FDH1	YOR388C	YMR244W	Q04018	355 aa		2.66	□□□□□ -1.98
FDH1	YOR388C	YLR285C-A	Q3E771	56 aa		2.66	□□□□□ -1.98
FDH1	YOR388C	RPS28A	Q3E7X9	67 aa	Predicted RBP	2.66	□□□□□ -1.98
FDH1	YOR388C	YJR107C-A	P0CT86	78 aa		2.65	□□□□□ -1.99
FDH1	YOR388C	UBC4	P15731	148 aa		2.65	□□□□□ -1.99
FDH1	YOR388C	GAT4	P40569	121 aa		2.65	□□□□□ -1.99
FDH1	YOR388C	MPC3	P53311	146 aa		2.65	□□□□□ -1.99
FDH1	YOR388C	YDR274C	P87283	123 aa		2.65	□□□□□ -1.99
FDH1	YOR388C	YLL006W-A	Q3E814	58 aa		2.65	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms