RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE4	YOR035C	YJL009W	P47078	108 aa		0.51	□□□□□ -2.33
SHE4	YOR035C	YGL149W	P53116	101 aa		0.51	□□□□□ -2.33
SHE4	YOR035C	DYN2	Q02647	92 aa		0.51	□□□□□ -2.33
SHE4	YOR035C	ELC1	Q03071	99 aa		0.51	□□□□□ -2.33
SHE4	YOR035C	MRPL44	P19956	98 aa		0.5	□□□□□ -2.33
SHE4	YOR035C	UTP11	P34247	250 aa	Predicted RBP	0.5	□□□□□ -2.33
SHE4	YOR035C	IRC21	Q04772	201 aa		0.5	□□□□□ -2.33
SHE4	YOR035C	AIM19	P40502	157 aa		0.5	□□□□□ -2.33
SHE4	YOR035C	RPL22B	P56628	122 aa	Known RBP	0.5	□□□□□ -2.33
SHE4	YOR035C	PHS1	P40857	217 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	SDH7	Q04401	133 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	YLR042C	Q07990	161 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	SLO1	Q3E784	85 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	YGR240C-A	Q3E786	66 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	YBR013C	P38215	129 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	YLR296W	Q05898	108 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	YOR011W-A	Q3E807	68 aa		0.49	□□□□□ -2.33
SHE4	YOR035C	ADK1	P07170	222 aa	Known RBP	0.48	□□□□□ -2.33
SHE4	YOR035C	MRPL11	P36521	249 aa	Predicted RBP	0.48	□□□□□ -2.33
SHE4	YOR035C	POR2	P40478	281 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	YKL018C-A	Q3E7A7	99 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	RRT15	Q3E811	62 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	PAU21	P0CE86	164 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	PAU22	P0CE87	164 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	SNF11	P38956	169 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	CNL1	Q06333	122 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	YOR376W-A	Q3E805	51 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	YOS1	Q3E834	85 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	KTI11	Q3E840	82 aa		0.48	□□□□□ -2.33
SHE4	YOR035C	HSP10	P38910	106 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	SPC24	Q04477	213 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	YDR029W	Q12111	104 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	YLR118C	Q12354	227 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	YLR099W-A	Q3E798	87 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	PFY1	P07274	126 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	MRP49	P32388	137 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	MVB12	P42939	101 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	MIC27	P50945	234 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	FRQ1	Q06389	190 aa		0.47	□□□□□ -2.33
SHE4	YOR035C	HAP3	P13434	144 aa		0.46	□□□□□ -2.34
SHE4	YOR035C	UBC4	P15731	148 aa		0.46	□□□□□ -2.34
SHE4	YOR035C	YCR101C	P25607	182 aa		0.46	□□□□□ -2.34
SHE4	YOR035C	YIR021W-A	Q3E739	70 aa		0.46	□□□□□ -2.34
SHE4	YOR035C	EMC5	P40540	141 aa		0.46	□□□□□ -2.34
SHE4	YOR035C	WIP1	Q2V2P8	89 aa		0.46	□□□□□ -2.34
SHE4	YOR035C	HUG1	Q6Q5K6	68 aa		0.46	□□□□□ -2.34
SHE4	YOR035C	VMA7	P39111	118 aa		0.45	□□□□□ -2.34
SHE4	YOR035C	AIM11	P87275	137 aa		0.45	□□□□□ -2.34
SHE4	YOR035C	ATP14	Q12349	124 aa		0.45	□□□□□ -2.34
SHE4	YOR035C	YER039C-A	P0CD97	72 aa		0.45	□□□□□ -2.34
SHE4	YOR035C	GSP1	P32835	219 aa	Known RBP	0.45	□□□□□ -2.34
SHE4	YOR035C	YDR210W	Q03482	75 aa		0.45	□□□□□ -2.34
SHE4	YOR035C	COA6	Q3E846	104 aa		0.45	□□□□□ -2.34
SHE4	YOR035C	YPR010C-A	A5Z2X5	72 aa		0.44	□□□□□ -2.34
SHE4	YOR035C	SEC59	P20048	519 aa		0.44	□□□□□ -2.34
SHE4	YOR035C	EMP24	P32803	203 aa	Known RBP	0.44	□□□□□ -2.34
SHE4	YOR035C	ERV14	P53173	138 aa		0.44	□□□□□ -2.34
SHE4	YOR035C	YKL044W	P36092	106 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	SAE3	P89114	91 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	YLR194C	Q05777	254 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	FCF2	Q12035	217 aa	Predicted RBP	0.43	□□□□□ -2.34
SHE4	YOR035C	YOR034C-A	Q3E735	80 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	RPL36B	O14455	100 aa	Known RBP	0.43	□□□□□ -2.34
SHE4	YOR035C	RPL36A	P05745	100 aa	Predicted RBP	0.43	□□□□□ -2.34
SHE4	YOR035C	YAR029W	P39549	74 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	YIL163C	P40448	117 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	YOR192C-C	Q3E736	78 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	KSH1	Q8TGJ3	72 aa		0.43	□□□□□ -2.34
SHE4	YOR035C	YLR157W-E	P0CF00	54 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	APS2	Q00381	147 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	ARL3	Q02804	198 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	GPI19	Q04082	140 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	BUD23	P25627	275 aa	Predicted RBP	0.42	□□□□□ -2.34
SHE4	YOR035C	RPB11	P38902	120 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	YGR025W	P53216	100 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	PAU12	P53343	120 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	YIL014C-A	Q02598	104 aa		0.42	□□□□□ -2.34
SHE4	YOR035C	YOR304C-A	O14468	76 aa		0.41	□□□□□ -2.34
SHE4	YOR035C	YHR130C	P38834	111 aa		0.41	□□□□□ -2.34
SHE4	YOR035C	SNU13	P39990	126 aa	Known RBP	0.41	□□□□□ -2.34
SHE4	YOR035C	YER187W	P40102	141 aa		0.41	□□□□□ -2.34
SHE4	YOR035C	RUB1	Q03919	77 aa		0.41	□□□□□ -2.34
SHE4	YOR035C	MRPL31	P14063	131 aa	Predicted RBP	0.41	□□□□□ -2.34
SHE4	YOR035C	PAM16	P42949	149 aa		0.41	□□□□□ -2.34
SHE4	YOR035C	HPA2	Q06592	156 aa		0.41	□□□□□ -2.34
SHE4	YOR035C	YOL118C	Q08259	102 aa		0.41	□□□□□ -2.34
SHE4	YOR035C	ERI1	P62651	68 aa	Known RBP	0.4	□□□□□ -2.34
SHE4	YOR035C	YPL261C	Q08976	102 aa		0.4	□□□□□ -2.34
SHE4	YOR035C	OST5	Q92316	86 aa		0.4	□□□□□ -2.34
SHE4	YOR035C	MED11	Q99278	115 aa		0.4	□□□□□ -2.34
SHE4	YOR035C	PAU2	P32612	120 aa		0.4	□□□□□ -2.35
SHE4	YOR035C	PAU24	P38155	120 aa		0.4	□□□□□ -2.35
SHE4	YOR035C	COX23	P38824	151 aa		0.4	□□□□□ -2.35
SHE4	YOR035C	YGR164W	P53291	111 aa		0.4	□□□□□ -2.35
SHE4	YOR035C	YLR365W	Q7LIF2	110 aa		0.4	□□□□□ -2.35
SHE4	YOR035C	ENV10	Q99382	181 aa		0.4	□□□□□ -2.35
SHE4	YOR035C	Q0017	Q9ZZX8	53 aa		0.4	□□□□□ -2.35
SHE4	YOR035C	GNA1	P43577	159 aa	Predicted RBP	0.39	□□□□□ -2.35
SHE4	YOR035C	UBC5	P15732	148 aa		0.39	□□□□□ -2.35
SHE4	YOR035C	YEA6	P39953	335 aa		0.39	□□□□□ -2.35

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