RNA–Protein interactions for RNA: YOL142W

RRP40, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP40, Length 723 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP40YOL142W APS1P35181 156 aa2.9□□□□□ -1.95
RRP40YOL142W MRPL11P36521 249 aaPredicted RBP2.9□□□□□ -1.95
RRP40YOL142W CNL1Q06333 122 aa2.9□□□□□ -1.95
RRP40YOL142W YLR050CQ12155 161 aaKnown RBP2.9□□□□□ -1.95
RRP40YOL142W YMR175W-AQ3E766 64 aa2.9□□□□□ -1.95
RRP40YOL142W COA6Q3E846 104 aa2.9□□□□□ -1.95
RRP40YOL142W YAR023CD6VPM8 179 aa2.89□□□□□ -1.95
RRP40YOL142W YAL065CO13511 128 aa2.89□□□□□ -1.95
RRP40YOL142W SEC11P15367 167 aa2.89□□□□□ -1.95
RRP40YOL142W YAL064WP39711 94 aa2.89□□□□□ -1.95
RRP40YOL142W AIM11P87275 137 aa2.89□□□□□ -1.95
RRP40YOL142W LCL2Q08045 131 aa2.89□□□□□ -1.95
RRP40YOL142W YEL067CP39978 195 aa2.88□□□□□ -1.95
RRP40YOL142W YKR041WP36134 250 aa2.87□□□□□ -1.95
RRP40YOL142W SHU1P38751 150 aa2.87□□□□□ -1.95
RRP40YOL142W CIN5P40917 295 aa2.87□□□□□ -1.95
RRP40YOL142W YGL230CP53074 147 aa2.87□□□□□ -1.95
RRP40YOL142W MRPS12P53732 153 aa2.87□□□□□ -1.95
RRP40YOL142W SCS22Q6Q595 175 aa2.87□□□□□ -1.95
RRP40YOL142W YDR034C-AP0C289 58 aa2.86□□□□□ -1.95
RRP40YOL142W MRPL44P19956 98 aa2.86□□□□□ -1.95
RRP40YOL142W YKL044WP36092 106 aa2.86□□□□□ -1.95
RRP40YOL142W PEX17P40155 199 aa2.86□□□□□ -1.95
RRP40YOL142W YDL241WQ07738 123 aa2.86□□□□□ -1.95
RRP40YOL142W YPL261CQ08976 102 aa2.86□□□□□ -1.95
RRP40YOL142W YDL157CQ12082 118 aa2.86□□□□□ -1.95
RRP40YOL142W VTC1P40046 129 aaRIP-Chip data2.85□□□□□ -1.95not detected
RRP40YOL142W YNR077CP53758 84 aa2.85□□□□□ -1.95
RRP40YOL142W YDR029WQ12111 104 aa2.85□□□□□ -1.95
RRP40YOL142W MSL1P40567 111 aaPredicted RBP2.84□□□□□ -1.95
RRP40YOL142W SNA2P56508 79 aa2.84□□□□□ -1.95
RRP40YOL142W RPL28P02406 149 aaKnown RBP2.83□□□□□ -1.96
RRP40YOL142W QCR8P08525 94 aa2.83□□□□□ -1.96
RRP40YOL142W YPL073CP40323 161 aa2.83□□□□□ -1.96
RRP40YOL142W RGM1Q00453 211 aa2.83□□□□□ -1.96
RRP40YOL142W NAT5Q08689 176 aa2.83□□□□□ -1.96
RRP40YOL142W FYV7Q12247 151 aa2.83□□□□□ -1.96
RRP40YOL142W FUN14P18411 198 aa2.82□□□□□ -1.96
RRP40YOL142W SCM4P32564 187 aa2.82□□□□□ -1.96
RRP40YOL142W LSM8P47093 109 aaKnown RBP2.82□□□□□ -1.96
RRP40YOL142W CGR1P53188 120 aa2.82□□□□□ -1.96
RRP40YOL142W YNL190WP53872 204 aa2.82□□□□□ -1.96
RRP40YOL142W IGO2Q9P305 131 aa2.82□□□□□ -1.96
RRP40YOL142W MBF1O14467 151 aaKnown RBP2.81□□□□□ -1.96
RRP40YOL142W STF1P01098 86 aa2.81□□□□□ -1.96
RRP40YOL142W AQY2P0CD90 149 aa2.81□□□□□ -1.96
RRP40YOL142W CWP2P43497 92 aa2.81□□□□□ -1.96
RRP40YOL142W YLL006W-AQ3E814 58 aa2.81□□□□□ -1.96
RRP40YOL142W YLR307C-AQ3E825 87 aa2.81□□□□□ -1.96
RRP40YOL142W UGX2P32772 223 aa2.8□□□□□ -1.96
RRP40YOL142W MVB12P42939 101 aa2.8□□□□□ -1.96
RRP40YOL142W YFL019CP43576 117 aa2.8□□□□□ -1.96
RRP40YOL142W ECM12O13529 151 aa2.79□□□□□ -1.96
RRP40YOL142W RPL29P05747 59 aaPredicted RBP2.79□□□□□ -1.96
RRP40YOL142W ATP5P09457 212 aa2.79□□□□□ -1.96
RRP40YOL142W YBL039W-BP0C268 59 aa2.79□□□□□ -1.96
RRP40YOL142W HAP3P13434 144 aa2.79□□□□□ -1.96
RRP40YOL142W SPT4P32914 102 aaPredicted RBP2.79□□□□□ -1.96
RRP40YOL142W RPF1P38805 295 aaKnown RBP2.79□□□□□ -1.96
RRP40YOL142W PAU23Q07987 124 aa2.78□□□□□ -1.96
RRP40YOL142W PAU17Q12370 124 aa2.78□□□□□ -1.96
RRP40YOL142W YIA6P40556 373 aa2.77□□□□□ -1.97
RRP40YOL142W ABF2Q02486 183 aa2.77□□□□□ -1.97
RRP40YOL142W LCL1Q02786 101 aa2.77□□□□□ -1.97
RRP40YOL142W YKL023C-AQ2V2P3 75 aa2.77□□□□□ -1.97
RRP40YOL142W YGL041C-BQ3E750 60 aa2.77□□□□□ -1.97
RRP40YOL142W YDL085C-AQ3E7B7 68 aaKnown RBP2.77□□□□□ -1.97
RRP40YOL142W UBC4P15731 148 aa2.76□□□□□ -1.97
RRP40YOL142W AIM19P40502 157 aa2.76□□□□□ -1.97
RRP40YOL142W YGL193CP53097 103 aa2.76□□□□□ -1.97
RRP40YOL142W YML079WQ03629 201 aa2.76□□□□□ -1.97
RRP40YOL142W HPA2Q06592 156 aa2.76□□□□□ -1.97
RRP40YOL142W Q0032Q9ZZX7 96 aa2.76□□□□□ -1.97
RRP40YOL142W MMS2P53152 137 aa2.75□□□□□ -1.97
RRP40YOL142W YOR020W-AQ3E824 90 aa2.75□□□□□ -1.97
RRP40YOL142W KNH1P50112 268 aa2.74□□□□□ -1.97
RRP40YOL142W SAE3P89114 91 aa2.74□□□□□ -1.97
RRP40YOL142W ELC1Q03071 99 aa2.74□□□□□ -1.97
RRP40YOL142W YLR363W-AQ3E747 85 aa2.74□□□□□ -1.97
RRP40YOL142W IRC21Q04772 201 aa2.73□□□□□ -1.97
RRP40YOL142W ICY1Q04329 127 aa2.72□□□□□ -1.97
RRP40YOL142W YLR296WQ05898 108 aa2.72□□□□□ -1.97
RRP40YOL142W YBR230W-AQ3E762 66 aa2.71□□□□□ -1.98
RRP40YOL142W YBL112CQ3E7Y4 105 aa2.71□□□□□ -1.98
RRP40YOL142W PAI3P01094 68 aa2.7□□□□□ -1.98
RRP40YOL142W RPL26AP05743 127 aaKnown RBP2.7□□□□□ -1.98
RRP40YOL142W DDR48P18899 430 aaKnown RBP2.7□□□□□ -1.98
RRP40YOL142W YHR130CP38834 111 aa2.7□□□□□ -1.98
RRP40YOL142W YER181CP40097 107 aa2.7□□□□□ -1.98
RRP40YOL142W RPL26BP53221 127 aaKnown RBP2.7□□□□□ -1.98
RRP40YOL142W YOR034C-AQ3E735 80 aa2.7□□□□□ -1.98
RRP40YOL142W YNL042W-BQ3E7Z2 85 aa2.7□□□□□ -1.98
RRP40YOL142W ISD11Q6Q560 94 aa2.7□□□□□ -1.98
RRP40YOL142W YLR236CA0A023PZG4 107 aa2.69□□□□□ -1.98
RRP40YOL142W POP7P38291 140 aa2.69□□□□□ -1.98
RRP40YOL142W LSM6Q06406 86 aaKnown RBP2.69□□□□□ -1.98
RRP40YOL142W YPL257WQ08974 193 aa2.69□□□□□ -1.98
RRP40YOL142W YER039C-AP0CD97 72 aa2.68□□□□□ -1.98
RRP40YOL142W YLR156WP0CE96 114 aa2.68□□□□□ -1.98
RRP40YOL142W YLR159WP0CE97 114 aa2.68□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 45.4 ms