RNA–Protein interactions for RNA: YOL112W

MSB4, Transcript of GTPase-activating protein of the Ras superfamily, yeast

Gene MSB4, Length 1,479 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB4	YOL112W	FUN14	P18411	198 aa		6.31	□□□□□ -1.4
MSB4	YOL112W	CWP2	P43497	92 aa		6.3	□□□□□ -1.4
MSB4	YOL112W	MVB12	P42939	101 aa		6.29	□□□□□ -1.4
MSB4	YOL112W	IGO2	Q9P305	131 aa		6.29	□□□□□ -1.4
MSB4	YOL112W	ECM12	O13529	151 aa		6.28	□□□□□ -1.4
MSB4	YOL112W	CDC43	P18898	376 aa		6.28	□□□□□ -1.4
MSB4	YOL112W	YFR057W	P43625	151 aa		6.28	□□□□□ -1.4
MSB4	YOL112W	YLL006W-A	Q3E814	58 aa		6.28	□□□□□ -1.4
MSB4	YOL112W	UGX2	P32772	223 aa		6.28	□□□□□ -1.4
MSB4	YOL112W	RPF1	P38805	295 aa	Known RBP	6.28	□□□□□ -1.4
MSB4	YOL112W	ABF2	Q02486	183 aa		6.28	□□□□□ -1.4
MSB4	YOL112W	LCL1	Q02786	101 aa		6.28	□□□□□ -1.4
MSB4	YOL112W	IGD1	P43598	195 aa		6.27	□□□□□ -1.41
MSB4	YOL112W	FYV7	Q12247	151 aa		6.27	□□□□□ -1.41
MSB4	YOL112W	MBF1	O14467	151 aa	Known RBP	6.26	□□□□□ -1.41
MSB4	YOL112W	STF1	P01098	86 aa		6.26	□□□□□ -1.41
MSB4	YOL112W	HAP3	P13434	144 aa		6.26	□□□□□ -1.41
MSB4	YOL112W	YFL019C	P43576	117 aa		6.26	□□□□□ -1.41
MSB4	YOL112W	YGL041C-B	Q3E750	60 aa		6.26	□□□□□ -1.41
MSB4	YOL112W	YBL039W-B	P0C268	59 aa		6.25	□□□□□ -1.41
MSB4	YOL112W	MID2	P36027	376 aa		6.25	□□□□□ -1.41
MSB4	YOL112W	YCR007C	P25354	239 aa		6.24	□□□□□ -1.41
MSB4	YOL112W	UBC11	P52492	156 aa		6.24	□□□□□ -1.41
MSB4	YOL112W	Q0032	Q9ZZX7	96 aa		6.24	□□□□□ -1.41
MSB4	YOL112W	LSM8	P47093	109 aa	Known RBP	6.23	□□□□□ -1.41
MSB4	YOL112W	MMS2	P53152	137 aa		6.23	□□□□□ -1.41
MSB4	YOL112W	CGR1	P53188	120 aa		6.23	□□□□□ -1.41
MSB4	YOL112W	YML079W	Q03629	201 aa		6.23	□□□□□ -1.41
MSB4	YOL112W	SCM4	P32564	187 aa		6.22	□□□□□ -1.41
MSB4	YOL112W	ATP5	P09457	212 aa		6.22	□□□□□ -1.41
MSB4	YOL112W	AIM19	P40502	157 aa		6.21	□□□□□ -1.42
MSB4	YOL112W	HPA2	Q06592	156 aa		6.21	□□□□□ -1.42
MSB4	YOL112W	RPL29	P05747	59 aa	Predicted RBP	6.19	□□□□□ -1.42
MSB4	YOL112W	YFL067W	P43537	175 aa		6.17	□□□□□ -1.42
MSB4	YOL112W	YGL193C	P53097	103 aa		6.17	□□□□□ -1.42
MSB4	YOL112W	YKL023C-A	Q2V2P3	75 aa		6.16	□□□□□ -1.42
MSB4	YOL112W	YNL162W-A	Q3E7A8	72 aa		6.16	□□□□□ -1.42
MSB4	YOL112W	CPR1	P14832	162 aa	Known RBP	6.15	□□□□□ -1.42
MSB4	YOL112W	UBC4	P15731	148 aa		6.15	□□□□□ -1.42
MSB4	YOL112W	DDR48	P18899	430 aa	Known RBP	6.15	□□□□□ -1.42
MSB4	YOL112W	YIA6	P40556	373 aa		6.15	□□□□□ -1.43
MSB4	YOL112W	ELC1	Q03071	99 aa		6.15	□□□□□ -1.43
MSB4	YOL112W	PAU23	Q07987	124 aa		6.15	□□□□□ -1.43
MSB4	YOL112W	PAU17	Q12370	124 aa		6.15	□□□□□ -1.43
MSB4	YOL112W	KNH1	P50112	268 aa		6.14	□□□□□ -1.43
MSB4	YOL112W	EOS1	P53938	366 aa		6.14	□□□□□ -1.43
MSB4	YOL112W	RGM1	Q00453	211 aa		6.14	□□□□□ -1.43
MSB4	YOL112W	YDL085C-A	Q3E7B7	68 aa	Known RBP	6.14	□□□□□ -1.43
MSB4	YOL112W	SAE3	P89114	91 aa		6.13	□□□□□ -1.43
MSB4	YOL112W	ARO2	P28777	376 aa	Known RBP	6.12	□□□□□ -1.43
MSB4	YOL112W	YOR020W-A	Q3E824	90 aa		6.12	□□□□□ -1.43
MSB4	YOL112W	IRC21	Q04772	201 aa		6.11	□□□□□ -1.43
MSB4	YOL112W	YLR363W-A	Q3E747	85 aa		6.1	□□□□□ -1.43
MSB4	YOL112W	YBL112C	Q3E7Y4	105 aa		6.1	□□□□□ -1.43
MSB4	YOL112W	COX10	P21592	462 aa		6.09	□□□□□ -1.44
MSB4	YOL112W	YOR034C-A	Q3E735	80 aa		6.09	□□□□□ -1.44
MSB4	YOL112W	ICY1	Q04329	127 aa		6.08	□□□□□ -1.44
MSB4	YOL112W	RPL26A	P05743	127 aa	Known RBP	6.06	□□□□□ -1.44
MSB4	YOL112W	YHR130C	P38834	111 aa		6.06	□□□□□ -1.44
MSB4	YOL112W	RPL26B	P53221	127 aa	Known RBP	6.06	□□□□□ -1.44
MSB4	YOL112W	YPL257W	Q08974	193 aa		6.06	□□□□□ -1.44
MSB4	YOL112W	YBR230W-A	Q3E762	66 aa		6.06	□□□□□ -1.44
MSB4	YOL112W	YER181C	P40097	107 aa		6.05	□□□□□ -1.44
MSB4	YOL112W	YNL042W-B	Q3E7Z2	85 aa		6.05	□□□□□ -1.44
MSB4	YOL112W	YLR415C	O13578	112 aa		6.04	□□□□□ -1.44
MSB4	YOL112W	YLR156W	P0CE96	114 aa		6.03	□□□□□ -1.44
MSB4	YOL112W	YLR159W	P0CE97	114 aa		6.03	□□□□□ -1.44
MSB4	YOL112W	YLR161W	P0CE98	114 aa		6.03	□□□□□ -1.44
MSB4	YOL112W	YJL127C-B	Q3E828	52 aa		6.03	□□□□□ -1.44
MSB4	YOL112W	PAI3	P01094	68 aa		6.02	□□□□□ -1.44
MSB4	YOL112W	YER039C-A	P0CD97	72 aa		6.02	□□□□□ -1.44
MSB4	YOL112W	DDR2	P89113	61 aa		6.02	□□□□□ -1.44
MSB4	YOL112W	YDR010C	Q12426	110 aa		6.02	□□□□□ -1.45
MSB4	YOL112W	EDC2	P40023	145 aa	Predicted RBP	6.01	□□□□□ -1.45
MSB4	YOL112W	YGL149W	P53116	101 aa		6.01	□□□□□ -1.45
MSB4	YOL112W	FYV5	P25585	152 aa		6	□□□□□ -1.45
MSB4	YOL112W	SPT4	P32914	102 aa	Predicted RBP	6	□□□□□ -1.45
MSB4	YOL112W	GLC8	P41818	229 aa		6	□□□□□ -1.45
MSB4	YOL112W	YLR296W	Q05898	108 aa		6	□□□□□ -1.45
MSB4	YOL112W	NHP2	P32495	156 aa	Predicted RBP	5.99	□□□□□ -1.45
MSB4	YOL112W	CWC27	Q02770	301 aa		5.99	□□□□□ -1.45
MSB4	YOL112W	LSM6	Q06406	86 aa	Known RBP	5.99	□□□□□ -1.45
MSB4	YOL112W	POP7	P38291	140 aa		5.98	□□□□□ -1.45
MSB4	YOL112W	HYP2	P23301	157 aa	Known RBP	5.97	□□□□□ -1.45
MSB4	YOL112W	MRPL24	P36525	258 aa	Predicted RBP	5.97	□□□□□ -1.45
MSB4	YOL112W	YOR268C	Q08734	132 aa		5.97	□□□□□ -1.45
MSB4	YOL112W	YLR236C	A0A023PZG4	107 aa		5.96	□□□□□ -1.45
MSB4	YOL112W	MET32	Q12041	191 aa		5.96	□□□□□ -1.45
MSB4	YOL112W	HUR1	P45820	110 aa		5.96	□□□□□ -1.46
MSB4	YOL112W	MPC3	P53311	146 aa		5.96	□□□□□ -1.46
MSB4	YOL112W	BSC4	P53841	131 aa		5.96	□□□□□ -1.46
MSB4	YOL112W	YGR121W-A	Q3E816	71 aa		5.96	□□□□□ -1.46
MSB4	YOL112W	MSA2	P36157	363 aa		5.95	□□□□□ -1.46
MSB4	YOL112W	SPG1	P50088	95 aa		5.94	□□□□□ -1.46
MSB4	YOL112W	MHR1	Q06630	226 aa		5.94	□□□□□ -1.46
MSB4	YOL112W	YHR007C-A	Q07074	71 aa		5.94	□□□□□ -1.46
MSB4	YOL112W	YJR085C	P47131	105 aa	Known RBP	5.93	□□□□□ -1.46
MSB4	YOL112W	YIL102C-A	Q2V2P5	75 aa		5.92	□□□□□ -1.46
MSB4	YOL112W	YMR230W-A	Q3E7B5	62 aa		5.92	□□□□□ -1.46
MSB4	YOL112W	KRE1	P17260	313 aa		5.9	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms