RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W YNR077CP53758 84 aa5.78□□□□□ -1.48
YPT11YNL304W ABF2Q02486 183 aa5.78□□□□□ -1.48
YPT11YNL304W YAL065CO13511 128 aa5.77□□□□□ -1.49
YPT11YNL304W MRPS12P53732 153 aa5.77□□□□□ -1.49
YPT11YNL304W SNA2P56508 79 aa5.77□□□□□ -1.49
YPT11YNL304W ANB1P19211 157 aa5.76□□□□□ -1.49
YPT11YNL304W YER181CP40097 107 aa5.76□□□□□ -1.49
YPT11YNL304W CWP2P43497 92 aa5.76□□□□□ -1.49
YPT11YNL304W SMD1Q02260 146 aaPredicted RBP5.76□□□□□ -1.49
YPT11YNL304W PAI3P01094 68 aa5.75□□□□□ -1.49
YPT11YNL304W YBL081WP38180 368 aaKnown RBP5.75□□□□□ -1.49
YPT11YNL304W YNL190WP53872 204 aa5.75□□□□□ -1.49
YPT11YNL304W AQY2P0CD90 149 aa5.74□□□□□ -1.49
YPT11YNL304W MBF1O14467 151 aaKnown RBP5.73□□□□□ -1.49
YPT11YNL304W MID2P36027 376 aa5.73□□□□□ -1.49
YPT11YNL304W YPR195CQ06594 109 aa5.73□□□□□ -1.49
YPT11YNL304W YDR029WQ12111 104 aa5.73□□□□□ -1.49
YPT11YNL304W YLL006W-AQ3E814 58 aa5.73□□□□□ -1.49
YPT11YNL304W UIP3P39547 235 aa5.72□□□□□ -1.49
YPT11YNL304W YIA6P40556 373 aa5.72□□□□□ -1.49
YPT11YNL304W YDR034C-AP0C289 58 aa5.71□□□□□ -1.5
YPT11YNL304W NHP2P32495 156 aaPredicted RBP5.71□□□□□ -1.5
YPT11YNL304W YHR130CP38834 111 aa5.71□□□□□ -1.5
YPT11YNL304W MVB12P42939 101 aa5.71□□□□□ -1.5
YPT11YNL304W YKL023C-AQ2V2P3 75 aa5.71□□□□□ -1.5
YPT11YNL304W YGL041C-BQ3E750 60 aa5.71□□□□□ -1.5
YPT11YNL304W MRP10O75012 95 aa5.7□□□□□ -1.5
YPT11YNL304W POP7P38291 140 aa5.7□□□□□ -1.5
YPT11YNL304W UBC11P52492 156 aa5.7□□□□□ -1.5
YPT11YNL304W YOR020W-AQ3E824 90 aa5.7□□□□□ -1.5
YPT11YNL304W YBL039W-BP0C268 59 aa5.69□□□□□ -1.5
YPT11YNL304W YFL019CP43576 117 aa5.69□□□□□ -1.5
YPT11YNL304W YLR296WQ05898 108 aa5.69□□□□□ -1.5
YPT11YNL304W MET32Q12041 191 aa5.69□□□□□ -1.5
YPT11YNL304W HPA2Q06592 156 aa5.68□□□□□ -1.5
YPT11YNL304W MHR1Q06630 226 aa5.68□□□□□ -1.5
YPT11YNL304W Q0032Q9ZZX7 96 aa5.68□□□□□ -1.5
YPT11YNL304W COX10P21592 462 aa5.67□□□□□ -1.5
YPT11YNL304W LSM6Q06406 86 aaKnown RBP5.67□□□□□ -1.5
YPT11YNL304W YIL102C-AQ2V2P5 75 aa5.67□□□□□ -1.5
YPT11YNL304W YPL229WQ99395 206 aa5.67□□□□□ -1.5
YPT11YNL304W RGM1Q00453 211 aa5.66□□□□□ -1.5
YPT11YNL304W ECM12O13529 151 aa5.65□□□□□ -1.5
YPT11YNL304W RPL29P05747 59 aaPredicted RBP5.65□□□□□ -1.5
YPT11YNL304W RPL26AP05743 127 aaKnown RBP5.64□□□□□ -1.51
YPT11YNL304W ARO2P28777 376 aaKnown RBP5.64□□□□□ -1.51
YPT11YNL304W RPL26BP53221 127 aaKnown RBP5.64□□□□□ -1.51
YPT11YNL304W EOS1P53938 366 aa5.64□□□□□ -1.51
YPT11YNL304W AIM19P40502 157 aa5.63□□□□□ -1.51
YPT11YNL304W KNH1P50112 268 aa5.63□□□□□ -1.51
YPT11YNL304W STF1P01098 86 aa5.62□□□□□ -1.51
YPT11YNL304W YPR170W-BP0C5R9 85 aa5.62□□□□□ -1.51
YPT11YNL304W GAT4P40569 121 aa5.62□□□□□ -1.51
YPT11YNL304W PEX22P39718 180 aa5.61□□□□□ -1.51
YPT11YNL304W HYP2P23301 157 aaKnown RBP5.6□□□□□ -1.51
YPT11YNL304W HUR1P45820 110 aa5.6□□□□□ -1.51
YPT11YNL304W IRC21Q04772 201 aa5.6□□□□□ -1.51
YPT11YNL304W LCL2Q08045 131 aa5.6□□□□□ -1.51
YPT11YNL304W CPR1P14832 162 aaKnown RBP5.59□□□□□ -1.51
YPT11YNL304W MRPL24P36525 258 aaPredicted RBP5.59□□□□□ -1.51
YPT11YNL304W YNL198CP40166 100 aa5.59□□□□□ -1.51
YPT11YNL304W ICY1Q04329 127 aa5.59□□□□□ -1.51
YPT11YNL304W UBC4P15731 148 aa5.58□□□□□ -1.52
YPT11YNL304W TMA7Q3E764 64 aaKnown RBP5.58□□□□□ -1.52
YPT11YNL304W SMP1P38128 452 aa5.57□□□□□ -1.52
YPT11YNL304W IGD1P43598 195 aa5.56□□□□□ -1.52
YPT11YNL304W LCL1Q02786 101 aa5.55□□□□□ -1.52
YPT11YNL304W YNL162W-AQ3E7A8 72 aa5.55□□□□□ -1.52
YPT11YNL304W ISU2Q12056 156 aa5.54□□□□□ -1.52
YPT11YNL304W YOR034C-AQ3E735 80 aa5.54□□□□□ -1.52
YPT11YNL304W YER039C-AP0CD97 72 aa5.53□□□□□ -1.52
YPT11YNL304W YLR307C-AQ3E825 87 aa5.53□□□□□ -1.52
YPT11YNL304W DUT1P33317 147 aa5.52□□□□□ -1.53
YPT11YNL304W YGL193CP53097 103 aa5.52□□□□□ -1.53
YPT11YNL304W YNL042W-BQ3E7Z2 85 aa5.52□□□□□ -1.53
YPT11YNL304W FYV5P25585 152 aa5.51□□□□□ -1.53
YPT11YNL304W YJL127C-BQ3E828 52 aa5.51□□□□□ -1.53
YPT11YNL304W YLR236CA0A023PZG4 107 aa5.5□□□□□ -1.53
YPT11YNL304W YPL257WQ08974 193 aa5.5□□□□□ -1.53
YPT11YNL304W YBR230W-AQ3E762 66 aa5.5□□□□□ -1.53
YPT11YNL304W SPT4P32914 102 aaPredicted RBP5.48□□□□□ -1.53
YPT11YNL304W SFT1P43682 97 aa5.48□□□□□ -1.53
YPT11YNL304W MMS2P53152 137 aa5.48□□□□□ -1.53
YPT11YNL304W DDR2P89113 61 aa5.48□□□□□ -1.53
YPT11YNL304W MSA2P36157 363 aa5.47□□□□□ -1.53
YPT11YNL304W DSE2P38844 325 aa5.47□□□□□ -1.53
YPT11YNL304W MPC3P53311 146 aa5.47□□□□□ -1.53
YPT11YNL304W GIS2P53849 153 aaKnown RBP RIP-Chip data5.47□□□□□ -1.53not detected
YPT11YNL304W TSC3Q3E790 80 aa5.47□□□□□ -1.53
YPT11YNL304W MDN1Q12019 4910 aaKnown RBP5.47□□□□□ -1.53
YPT11YNL304W YJR107C-AP0CT86 78 aa5.44□□□□□ -1.54
YPT11YNL304W BET1P22804 142 aa5.44□□□□□ -1.54
YPT11YNL304W YBL112CQ3E7Y4 105 aa5.43□□□□□ -1.54
YPT11YNL304W YLR415CO13578 112 aa5.42□□□□□ -1.54
YPT11YNL304W YLR156WP0CE96 114 aa5.42□□□□□ -1.54
YPT11YNL304W YLR159WP0CE97 114 aa5.42□□□□□ -1.54
YPT11YNL304W YLR161WP0CE98 114 aa5.42□□□□□ -1.54
YPT11YNL304W YAR1P46683 200 aa5.41□□□□□ -1.54
YPT11YNL304W OST2P46964 130 aa5.41□□□□□ -1.54
YPT11YNL304W YHR139C-AO13536 103 aa5.4□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms