RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W YLL066W-BQ8TGJ7 56 aa2.75□□□□□ -1.97
USA1YML029W RPL31AP0C2H8 113 aaKnown RBP2.75□□□□□ -1.97
USA1YML029W MMS2P53152 137 aa2.75□□□□□ -1.97
USA1YML029W YKL044WP36092 106 aa2.74□□□□□ -1.97
USA1YML029W YHR130CP38834 111 aa2.74□□□□□ -1.97
USA1YML029W YEL008WP40001 126 aa2.74□□□□□ -1.97
USA1YML029W YDL085C-AQ3E7B7 68 aaKnown RBP2.74□□□□□ -1.97
USA1YML029W RPL28P02406 149 aaKnown RBP2.74□□□□□ -1.97
USA1YML029W CPR1P14832 162 aaKnown RBP2.74□□□□□ -1.97
USA1YML029W DFM1Q12743 341 aaKnown RBP2.74□□□□□ -1.97
USA1YML029W YCL021W-AQ96VH3 125 aa2.74□□□□□ -1.97
USA1YML029W YHR139C-AO13536 103 aa2.73□□□□□ -1.97
USA1YML029W ATP15P21306 62 aa2.73□□□□□ -1.97
USA1YML029W PEX17P40155 199 aa2.73□□□□□ -1.97
USA1YML029W AIM11P87275 137 aa2.73□□□□□ -1.97
USA1YML029W YLR194CQ05777 254 aa2.73□□□□□ -1.97
USA1YML029W PBA1Q05778 276 aa2.73□□□□□ -1.97
USA1YML029W YPL261CQ08976 102 aa2.73□□□□□ -1.97
USA1YML029W PPT2Q12036 173 aa2.73□□□□□ -1.97
USA1YML029W QCR8P08525 94 aa2.72□□□□□ -1.97
USA1YML029W YDL022C-AP0C5L6 82 aa2.72□□□□□ -1.97
USA1YML029W HAP3P13434 144 aa2.72□□□□□ -1.97
USA1YML029W YPL073CP40323 161 aa2.72□□□□□ -1.97
USA1YML029W YDR115WQ04598 105 aa2.72□□□□□ -1.97
USA1YML029W PAU23Q07987 124 aa2.72□□□□□ -1.97
USA1YML029W PAU17Q12370 124 aa2.72□□□□□ -1.97
USA1YML029W YIR021W-AQ3E739 70 aa2.72□□□□□ -1.97
USA1YML029W ADH1P00330 348 aaKnown RBP2.71□□□□□ -1.98
USA1YML029W YBR219CP38317 127 aa2.71□□□□□ -1.98
USA1YML029W SHU1P38751 150 aa2.71□□□□□ -1.98
USA1YML029W YGR039WP53225 103 aa2.71□□□□□ -1.98
USA1YML029W YMR295CQ03559 197 aa2.71□□□□□ -1.98
USA1YML029W YEL067CP39978 195 aa2.7□□□□□ -1.98
USA1YML029W VTC1P40046 129 aaRIP-Chip data2.7□□□□□ -1.98not detected
USA1YML029W MRPL24P36525 258 aaPredicted RBP2.7□□□□□ -1.98
USA1YML029W YGL034CP53186 121 aa2.7□□□□□ -1.98
USA1YML029W YNR077CP53758 84 aa2.7□□□□□ -1.98
USA1YML029W IGO2Q9P305 131 aa2.7□□□□□ -1.98
USA1YML029W MBF1O14467 151 aaKnown RBP2.69□□□□□ -1.98
USA1YML029W PEX22P39718 180 aa2.69□□□□□ -1.98
USA1YML029W YGL041C-BQ3E750 60 aa2.69□□□□□ -1.98
USA1YML029W ISD11Q6Q560 94 aa2.69□□□□□ -1.98
USA1YML029W INO4P13902 151 aa2.69□□□□□ -1.98
USA1YML029W ANB1P19211 157 aa2.69□□□□□ -1.98
USA1YML029W COX14P39103 70 aa2.69□□□□□ -1.98
USA1YML029W MRPS12P53732 153 aa2.69□□□□□ -1.98
USA1YML029W YOR376W-AQ3E805 51 aa2.69□□□□□ -1.98
USA1YML029W YAR023CD6VPM8 179 aa2.68□□□□□ -1.98
USA1YML029W SVP26P38869 228 aa2.68□□□□□ -1.98
USA1YML029W SFT1P43682 97 aa2.68□□□□□ -1.98
USA1YML029W ELC1Q03071 99 aa2.68□□□□□ -1.98
USA1YML029W YAL065CO13511 128 aa2.68□□□□□ -1.98
USA1YML029W YLR363W-AQ3E747 85 aa2.68□□□□□ -1.98
USA1YML029W YML079WQ03629 201 aa2.67□□□□□ -1.98
USA1YML029W RRT15Q3E811 62 aa2.67□□□□□ -1.98
USA1YML029W RPL29P05747 59 aaPredicted RBP2.67□□□□□ -1.98
USA1YML029W GAT4P40569 121 aa2.67□□□□□ -1.98
USA1YML029W CWP2P43497 92 aa2.67□□□□□ -1.98
USA1YML029W HYP2P23301 157 aaKnown RBP2.66□□□□□ -1.98
USA1YML029W YAL064WP39711 94 aa2.66□□□□□ -1.98
USA1YML029W COF1Q03048 143 aaKnown RBP2.66□□□□□ -1.98
USA1YML029W YDR029WQ12111 104 aa2.66□□□□□ -1.98
USA1YML029W YOR020W-AQ3E824 90 aa2.66□□□□□ -1.98
USA1YML029W YNL190WP53872 204 aa2.66□□□□□ -1.98
USA1YML029W YDR034C-AP0C289 58 aa2.65□□□□□ -1.99
USA1YML029W COX10P21592 462 aa2.65□□□□□ -1.99
USA1YML029W YBL039W-BP0C268 59 aa2.65□□□□□ -1.99
USA1YML029W YIA6P40556 373 aa2.65□□□□□ -1.99
USA1YML029W YFL065CP43539 102 aa2.65□□□□□ -1.99
USA1YML029W YFL019CP43576 117 aa2.65□□□□□ -1.99
USA1YML029W LCL1Q02786 101 aa2.65□□□□□ -1.99
USA1YML029W YPR203WQ08994 102 aa2.65□□□□□ -1.99
USA1YML029W AQY2P0CD90 149 aa2.64□□□□□ -1.99
USA1YML029W HOT13P36078 116 aa2.64□□□□□ -1.99
USA1YML029W ECM12O13529 151 aa2.64□□□□□ -1.99
USA1YML029W SPT4P32914 102 aaPredicted RBP2.64□□□□□ -1.99
USA1YML029W MID2P36027 376 aa2.64□□□□□ -1.99
USA1YML029W YPR195CQ06594 109 aa2.64□□□□□ -1.99
USA1YML029W YKL023C-AQ2V2P3 75 aa2.64□□□□□ -1.99
USA1YML029W YER181CP40097 107 aa2.63□□□□□ -1.99
USA1YML029W KNH1P50112 268 aa2.63□□□□□ -1.99
USA1YML029W GIS2P53849 153 aaKnown RBP RIP-Chip data2.63□□□□□ -1.99not detected
USA1YML029W YLR296WQ05898 108 aa2.63□□□□□ -1.99
USA1YML029W PAI3P01094 68 aa2.63□□□□□ -1.99
USA1YML029W PBI2P0CT04 75 aaKnown RBP2.63□□□□□ -1.99
USA1YML029W MVB12P42939 101 aa2.63□□□□□ -1.99
USA1YML029W SNA2P56508 79 aa2.63□□□□□ -1.99
USA1YML029W YLL006W-AQ3E814 58 aa2.63□□□□□ -1.99
USA1YML029W YPR170W-BP0C5R9 85 aa2.62□□□□□ -1.99
USA1YML029W SMD1Q02260 146 aaPredicted RBP2.62□□□□□ -1.99
USA1YML029W LCL2Q08045 131 aa2.62□□□□□ -1.99
USA1YML029W RPL26AP05743 127 aaKnown RBP2.61□□□□□ -1.99
USA1YML029W RPL26BP53221 127 aaKnown RBP2.61□□□□□ -1.99
USA1YML029W YIL102C-AQ2V2P5 75 aa2.61□□□□□ -1.99
USA1YML029W RGM1Q00453 211 aa2.61□□□□□ -1.99
USA1YML029W SHH4Q06236 168 aa2.61□□□□□ -1.99
USA1YML029W HPA2Q06592 156 aa2.61□□□□□ -1.99
USA1YML029W YLR307C-AQ3E825 87 aa2.61□□□□□ -1.99
USA1YML029W OST2P46964 130 aa2.6□□□□□ -1.99
USA1YML029W LSM6Q06406 86 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms