RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W NRG2P38082 220 aa5.48□□□□□ -1.53
SNF7YLR025W YNL190WP53872 204 aa5.48□□□□□ -1.53
SNF7YLR025W YGR240C-AQ3E786 66 aa5.48□□□□□ -1.53
SNF7YLR025W KRE9P39005 276 aa5.47□□□□□ -1.53
SNF7YLR025W ERI1P62651 68 aaKnown RBP5.47□□□□□ -1.53
SNF7YLR025W COX12Q01519 83 aa5.47□□□□□ -1.53
SNF7YLR025W ABF2Q02486 183 aa5.47□□□□□ -1.53
SNF7YLR025W CPR1P14832 162 aaKnown RBP5.46□□□□□ -1.54
SNF7YLR025W YIA6P40556 373 aa5.46□□□□□ -1.54
SNF7YLR025W MRPS12P53732 153 aa5.46□□□□□ -1.54
SNF7YLR025W OST2P46964 130 aa5.45□□□□□ -1.54
SNF7YLR025W EOS1P53938 366 aa5.45□□□□□ -1.54
SNF7YLR025W YMR295CQ03559 197 aa5.45□□□□□ -1.54
SNF7YLR025W YMR122W-AQ3E842 84 aa5.45□□□□□ -1.54
SNF7YLR025W ENV10Q99382 181 aa5.45□□□□□ -1.54
SNF7YLR025W SGF11Q03067 99 aa5.44□□□□□ -1.54
SNF7YLR025W CRC1Q12289 327 aa5.44□□□□□ -1.54
SNF7YLR025W COX10P21592 462 aa5.43□□□□□ -1.54
SNF7YLR025W INO4P13902 151 aa5.42□□□□□ -1.54
SNF7YLR025W DSE2P38844 325 aa5.42□□□□□ -1.54
SNF7YLR025W CWP2P43497 92 aa5.42□□□□□ -1.54
SNF7YLR025W VAM10Q08474 114 aa5.42□□□□□ -1.54
SNF7YLR025W RPA12P32529 125 aaKnown RBP5.41□□□□□ -1.54
SNF7YLR025W COX14P39103 70 aa5.41□□□□□ -1.54
SNF7YLR025W HUR1P45820 110 aa5.41□□□□□ -1.54
SNF7YLR025W YPR010C-AA5Z2X5 72 aa5.4□□□□□ -1.54
SNF7YLR025W TOA2P32774 122 aa5.4□□□□□ -1.54
SNF7YLR025W MRPL24P36525 258 aaPredicted RBP5.4□□□□□ -1.54
SNF7YLR025W YOR020W-AQ3E824 90 aa5.4□□□□□ -1.54
SNF7YLR025W ERG28P40030 148 aa5.39□□□□□ -1.55
SNF7YLR025W RPR2P40571 144 aa5.39□□□□□ -1.55
SNF7YLR025W YCR085WP25650 117 aa5.38□□□□□ -1.55
SNF7YLR025W ISD11Q6Q560 94 aa5.38□□□□□ -1.55
SNF7YLR025W YBR219CP38317 127 aa5.37□□□□□ -1.55
SNF7YLR025W AIM19P40502 157 aa5.37□□□□□ -1.55
SNF7YLR025W RGM1Q00453 211 aa5.37□□□□□ -1.55
SNF7YLR025W SMD1Q02260 146 aaPredicted RBP5.37□□□□□ -1.55
SNF7YLR025W YLR281CQ05863 155 aa5.37□□□□□ -1.55
SNF7YLR025W YMR175W-AQ3E766 64 aa5.37□□□□□ -1.55
SNF7YLR025W YLL006W-AQ3E814 58 aa5.37□□□□□ -1.55
SNF7YLR025W HAL1Q01766 294 aa5.36□□□□□ -1.55
SNF7YLR025W SVP26P38869 228 aa5.35□□□□□ -1.55
SNF7YLR025W SPC1P46965 94 aa5.35□□□□□ -1.55
SNF7YLR025W PBA1Q05778 276 aa5.35□□□□□ -1.55
SNF7YLR025W YMR320WQ04897 101 aa5.34□□□□□ -1.55
SNF7YLR025W PBI2P0CT04 75 aaKnown RBP5.33□□□□□ -1.56
SNF7YLR025W YDL241WQ07738 123 aa5.33□□□□□ -1.56
SNF7YLR025W YPL229WQ99395 206 aa5.33□□□□□ -1.56
SNF7YLR025W NUM1Q00402 2748 aa5.33□□□□□ -1.56
SNF7YLR025W YFL065CP43539 102 aa5.32□□□□□ -1.56
SNF7YLR025W KNH1P50112 268 aa5.32□□□□□ -1.56
SNF7YLR025W YPR203WQ08994 102 aa5.32□□□□□ -1.56
SNF7YLR025W YAL065CO13511 128 aa5.31□□□□□ -1.56
SNF7YLR025W YAL064WP39711 94 aa5.31□□□□□ -1.56
SNF7YLR025W AQY2P0CD90 149 aa5.3□□□□□ -1.56
SNF7YLR025W RPC10P40422 70 aa5.3□□□□□ -1.56
SNF7YLR025W MVB12P42939 101 aa5.3□□□□□ -1.56
SNF7YLR025W SKI6P46948 246 aaPredicted RBP5.3□□□□□ -1.56
SNF7YLR025W YOR034C-AQ3E735 80 aa5.3□□□□□ -1.56
SNF7YLR025W RPL26AP05743 127 aaKnown RBP5.29□□□□□ -1.56
SNF7YLR025W RPL33AP05744 107 aaKnown RBP5.29□□□□□ -1.56
SNF7YLR025W RPL33BP41056 107 aaKnown RBP5.29□□□□□ -1.56
SNF7YLR025W RPL26BP53221 127 aaKnown RBP5.29□□□□□ -1.56
SNF7YLR025W IRC21Q04772 201 aa5.29□□□□□ -1.56
SNF7YLR025W RDS3Q06835 107 aaPredicted RBP5.28□□□□□ -1.56
SNF7YLR025W RTC6O14464 93 aa5.27□□□□□ -1.57
SNF7YLR025W YJR107C-AP0CT86 78 aa5.27□□□□□ -1.57
SNF7YLR025W YFL019CP43576 117 aa5.27□□□□□ -1.57
SNF7YLR025W ICY1Q04329 127 aa5.27□□□□□ -1.57
SNF7YLR025W TSC3Q3E790 80 aa5.27□□□□□ -1.57
SNF7YLR025W YBL039W-BP0C268 59 aa5.26□□□□□ -1.57
SNF7YLR025W YAL063C-AQ3E791 96 aa5.26□□□□□ -1.57
SNF7YLR025W RPL29P05747 59 aaPredicted RBP5.25□□□□□ -1.57
SNF7YLR025W YFL041W-AQ3E817 63 aa5.25□□□□□ -1.57
SNF7YLR025W YLR236CA0A023PZG4 107 aa5.24□□□□□ -1.57
SNF7YLR025W YAR023CD6VPM8 179 aa5.24□□□□□ -1.57
SNF7YLR025W MSA2P36157 363 aa5.24□□□□□ -1.57
SNF7YLR025W SNA2P56508 79 aa5.24□□□□□ -1.57
SNF7YLR025W EMC6Q12431 108 aa5.24□□□□□ -1.57
SNF7YLR025W YHR139C-AO13536 103 aa5.23□□□□□ -1.57
SNF7YLR025W MPC3P53311 146 aa5.23□□□□□ -1.57
SNF7YLR025W Q0032Q9ZZX7 96 aa5.23□□□□□ -1.57
SNF7YLR025W UTP20P35194 2493 aaKnown RBP5.22□□□□□ -1.57
SNF7YLR025W RAD6P06104 172 aa5.22□□□□□ -1.57
SNF7YLR025W YBL081WP38180 368 aaKnown RBP5.22□□□□□ -1.57
SNF7YLR025W YGR039WP53225 103 aa5.22□□□□□ -1.57
SNF7YLR025W YAR1P46683 200 aa5.21□□□□□ -1.58
SNF7YLR025W YDR381C-AQ3E6R5 114 aa5.21□□□□□ -1.58
SNF7YLR025W RRT15Q3E811 62 aa5.21□□□□□ -1.58
SNF7YLR025W KRE1P17260 313 aa5.2□□□□□ -1.58
SNF7YLR025W COF1Q03048 143 aaKnown RBP5.2□□□□□ -1.58
SNF7YLR025W YDR115WQ04598 105 aa5.2□□□□□ -1.58
SNF7YLR025W ATP18P81450 59 aa5.19□□□□□ -1.58
SNF7YLR025W YGL041C-BQ3E750 60 aa5.19□□□□□ -1.58
SNF7YLR025W UBC4P15731 148 aa5.18□□□□□ -1.58
SNF7YLR025W YRA2P36036 203 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
SNF7YLR025W YHL042WP38729 150 aa5.18□□□□□ -1.58
SNF7YLR025W YNL184CP53876 108 aa5.18□□□□□ -1.58
SNF7YLR025W FYV5P25585 152 aa5.17□□□□□ -1.58
SNF7YLR025W SFT1P43682 97 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 78.1 ms