RNA–Protein interactions for RNA: YJL178C

ATG27, Transcript of Type I membrane protein involved in autophagy and the Cvt pathway, yeastyeast

Gene ATG27, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG27YJL178C KRE1P17260 313 aa2.08□□□□□ -2.08
ATG27YJL178C YCR001WP25347 104 aa2.08□□□□□ -2.08
ATG27YJL178C MPC2P38857 129 aa2.08□□□□□ -2.08
ATG27YJL178C YEL008WP40001 126 aa2.08□□□□□ -2.08
ATG27YJL178C YDR274CP87283 123 aa2.08□□□□□ -2.08
ATG27YJL178C UBC5P15732 148 aa2.07□□□□□ -2.08
ATG27YJL178C MRP49P32388 137 aa2.07□□□□□ -2.08
ATG27YJL178C SPT4P32914 102 aaPredicted RBP2.07□□□□□ -2.08
ATG27YJL178C YBR219CP38317 127 aa2.07□□□□□ -2.08
ATG27YJL178C YER085CP40058 173 aa2.07□□□□□ -2.08
ATG27YJL178C ELC1Q03071 99 aa2.07□□□□□ -2.08
ATG27YJL178C YLR194CQ05777 254 aa2.06□□□□□ -2.08
ATG27YJL178C YLR296WQ05898 108 aa2.06□□□□□ -2.08
ATG27YJL178C YOR097CQ12274 175 aaPredicted RBP2.06□□□□□ -2.08
ATG27YJL178C YIL102C-AQ2V2P5 75 aa2.06□□□□□ -2.08
ATG27YJL178C YGR035W-AQ45U48 73 aa2.06□□□□□ -2.08
ATG27YJL178C UGX2P32772 223 aa2.05□□□□□ -2.08
ATG27YJL178C SHU1P38751 150 aa2.05□□□□□ -2.08
ATG27YJL178C COX12Q01519 83 aa2.05□□□□□ -2.08
ATG27YJL178C YMR295CQ03559 197 aa2.05□□□□□ -2.08
ATG27YJL178C RDS3Q06835 107 aaPredicted RBP2.05□□□□□ -2.08
ATG27YJL178C IGO2Q9P305 131 aa2.05□□□□□ -2.08
ATG27YJL178C DYN1P36022 4092 aa2.05□□□□□ -2.08
ATG27YJL178C PAI3P01094 68 aa2.04□□□□□ -2.08
ATG27YJL178C HYP2P23301 157 aaKnown RBP2.04□□□□□ -2.08
ATG27YJL178C UTP20P35194 2493 aaKnown RBP2.04□□□□□ -2.08
ATG27YJL178C YER181CP40097 107 aa2.04□□□□□ -2.08
ATG27YJL178C ARC15P40518 154 aaRIP-Chip data2.04□□□□□ -2.08not detected
ATG27YJL178C YIA6P40556 373 aa2.04□□□□□ -2.08
ATG27YJL178C PMP3P87284 55 aa2.04□□□□□ -2.08
ATG27YJL178C YML079WQ03629 201 aa2.04□□□□□ -2.08
ATG27YJL178C YKL023C-AQ2V2P3 75 aa2.04□□□□□ -2.08
ATG27YJL178C PEX17P40155 199 aa2.03□□□□□ -2.08
ATG27YJL178C AUA1P32450 94 aa2.02□□□□□ -2.09
ATG27YJL178C LSM6Q06406 86 aaKnown RBP2.02□□□□□ -2.09
ATG27YJL178C YOR034C-AQ3E735 80 aa2.02□□□□□ -2.09
ATG27YJL178C YMR122W-AQ3E842 84 aa2.02□□□□□ -2.09
ATG27YJL178C ANB1P19211 157 aa2.01□□□□□ -2.09
ATG27YJL178C RUB1Q03919 77 aa2.01□□□□□ -2.09
ATG27YJL178C VAM10Q08474 114 aa2.01□□□□□ -2.09
ATG27YJL178C YGR240C-AQ3E786 66 aa2.01□□□□□ -2.09
ATG27YJL178C YAL065CO13511 128 aa2□□□□□ -2.09
ATG27YJL178C QCR8P08525 94 aa2□□□□□ -2.09
ATG27YJL178C NHP2P32495 156 aaPredicted RBP2□□□□□ -2.09
ATG27YJL178C DSE2P38844 325 aa2□□□□□ -2.09
ATG27YJL178C YAL064WP39711 94 aa2□□□□□ -2.09
ATG27YJL178C SGF11Q03067 99 aa2□□□□□ -2.09
ATG27YJL178C YMR320WQ04897 101 aa2□□□□□ -2.09
ATG27YJL178C RRT15Q3E811 62 aa2□□□□□ -2.09
ATG27YJL178C YLL006W-AQ3E814 58 aa2□□□□□ -2.09
ATG27YJL178C YCR075W-AQ3E830 75 aa2□□□□□ -2.09
ATG27YJL178C YLL066W-BQ8TGJ7 56 aa2□□□□□ -2.09
ATG27YJL178C RPL33AP05744 107 aaKnown RBP1.99□□□□□ -2.09
ATG27YJL178C YRA2P36036 203 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
ATG27YJL178C POP7P38291 140 aa1.99□□□□□ -2.09
ATG27YJL178C RPL33BP41056 107 aaKnown RBP1.99□□□□□ -2.09
ATG27YJL178C CWP2P43497 92 aa1.99□□□□□ -2.09
ATG27YJL178C OST2P46964 130 aa1.99□□□□□ -2.09
ATG27YJL178C RGM1Q00453 211 aa1.99□□□□□ -2.09
ATG27YJL178C YBL112CQ3E7Y4 105 aa1.99□□□□□ -2.09
ATG27YJL178C YPL229WQ99395 206 aa1.99□□□□□ -2.09
ATG27YJL178C INO4P13902 151 aa1.98□□□□□ -2.09
ATG27YJL178C RPA12P32529 125 aaKnown RBP1.98□□□□□ -2.09
ATG27YJL178C HPA2Q06592 156 aa1.98□□□□□ -2.09
ATG27YJL178C SLO1Q3E784 85 aa1.98□□□□□ -2.09
ATG27YJL178C YHR130CP38834 111 aa1.97□□□□□ -2.09
ATG27YJL178C SVP26P38869 228 aa1.97□□□□□ -2.09
ATG27YJL178C ERG28P40030 148 aa1.97□□□□□ -2.09
ATG27YJL178C RPC10P40422 70 aa1.97□□□□□ -2.09
ATG27YJL178C ERI1P62651 68 aaKnown RBP1.97□□□□□ -2.09
ATG27YJL178C ABF2Q02486 183 aa1.97□□□□□ -2.09
ATG27YJL178C YPL257WQ08974 193 aa1.97□□□□□ -2.09
ATG27YJL178C YIL002W-AQ3E7Z5 69 aa1.97□□□□□ -2.09
ATG27YJL178C ENV10Q99382 181 aa1.97□□□□□ -2.09
ATG27YJL178C MRPL24P36525 258 aaPredicted RBP1.96□□□□□ -2.1
ATG27YJL178C ATX1P38636 73 aa1.96□□□□□ -2.1
ATG27YJL178C YAR029WP39549 74 aa1.96□□□□□ -2.1
ATG27YJL178C AIM19P40502 157 aa1.96□□□□□ -2.1
ATG27YJL178C HUR1P45820 110 aa1.96□□□□□ -2.1
ATG27YJL178C IRC21Q04772 201 aa1.96□□□□□ -2.1
ATG27YJL178C YMR175W-AQ3E766 64 aa1.96□□□□□ -2.1
ATG27YJL178C YLR236CA0A023PZG4 107 aa1.95□□□□□ -2.1
ATG27YJL178C MSA2P36157 363 aa1.95□□□□□ -2.1
ATG27YJL178C MVB12P42939 101 aa1.95□□□□□ -2.1
ATG27YJL178C KNH1P50112 268 aa1.95□□□□□ -2.1
ATG27YJL178C MPC3P53311 146 aa1.95□□□□□ -2.1
ATG27YJL178C ISD11Q6Q560 94 aa1.95□□□□□ -2.1
ATG27YJL178C RTC6O14464 93 aa1.94□□□□□ -2.1
ATG27YJL178C YFL065CP43539 102 aa1.94□□□□□ -2.1
ATG27YJL178C SPC1P46965 94 aa1.94□□□□□ -2.1
ATG27YJL178C EDC1P53080 175 aaPredicted RBP1.94□□□□□ -2.1
ATG27YJL178C YDL241WQ07738 123 aa1.94□□□□□ -2.1
ATG27YJL178C YPR203WQ08994 102 aa1.94□□□□□ -2.1
ATG27YJL178C YDR381C-AQ3E6R5 114 aa1.94□□□□□ -2.1
ATG27YJL178C YOR020W-AQ3E824 90 aa1.94□□□□□ -2.1
ATG27YJL178C RPL29P05747 59 aaPredicted RBP1.93□□□□□ -2.1
ATG27YJL178C AQY2P0CD90 149 aa1.93□□□□□ -2.1
ATG27YJL178C PBI2P0CT04 75 aaKnown RBP1.93□□□□□ -2.1
ATG27YJL178C ICY1Q04329 127 aa1.93□□□□□ -2.1
ATG27YJL178C YPR010C-AA5Z2X5 72 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms