RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W PEX22P39718 180 aa3.17□□□□□ -1.9
VPS29YHR012W YEL008WP40001 126 aa3.17□□□□□ -1.9
VPS29YHR012W HYP2P23301 157 aaKnown RBP3.16□□□□□ -1.9
VPS29YHR012W ARO2P28777 376 aaKnown RBP3.16□□□□□ -1.9
VPS29YHR012W YKL070WP36087 169 aa3.16□□□□□ -1.9
VPS29YHR012W SMP1P38128 452 aa3.16□□□□□ -1.9
VPS29YHR012W YDR010CQ12426 110 aa3.16□□□□□ -1.9
VPS29YHR012W YLR363W-AQ3E747 85 aa3.16□□□□□ -1.9
VPS29YHR012W COA3Q3E7B2 85 aa3.16□□□□□ -1.9
VPS29YHR012W DDR48P18899 430 aaKnown RBP3.15□□□□□ -1.91
VPS29YHR012W YPL073CP40323 161 aa3.15□□□□□ -1.91
VPS29YHR012W YFL019CP43576 117 aa3.14□□□□□ -1.91
VPS29YHR012W YML079WQ03629 201 aa3.14□□□□□ -1.91
VPS29YHR012W YPL261CQ08976 102 aa3.14□□□□□ -1.91
VPS29YHR012W YAL065CO13511 128 aa3.13□□□□□ -1.91
VPS29YHR012W YPR170W-BP0C5R9 85 aa3.13□□□□□ -1.91
VPS29YHR012W AQY2P0CD90 149 aa3.13□□□□□ -1.91
VPS29YHR012W YBR219CP38317 127 aa3.13□□□□□ -1.91
VPS29YHR012W CWP2P43497 92 aa3.13□□□□□ -1.91
VPS29YHR012W SMD1Q02260 146 aaPredicted RBP3.13□□□□□ -1.91
VPS29YHR012W YMR295CQ03559 197 aa3.13□□□□□ -1.91
VPS29YHR012W YLR415CO13578 112 aa3.12□□□□□ -1.91
VPS29YHR012W MBF1O14467 151 aaKnown RBP3.12□□□□□ -1.91
VPS29YHR012W YKR041WP36134 250 aa3.12□□□□□ -1.91
VPS29YHR012W PPT2Q12036 173 aa3.12□□□□□ -1.91
VPS29YHR012W TMA7Q3E764 64 aaKnown RBP3.12□□□□□ -1.91
VPS29YHR012W Q0032Q9ZZX7 96 aa3.12□□□□□ -1.91
VPS29YHR012W STF1P01098 86 aa3.11□□□□□ -1.91
VPS29YHR012W YDL022C-AP0C5L6 82 aa3.11□□□□□ -1.91
VPS29YHR012W ATP15P21306 62 aa3.11□□□□□ -1.91
VPS29YHR012W OXA1P39952 402 aa3.11□□□□□ -1.91
VPS29YHR012W YEL067CP39978 195 aa3.11□□□□□ -1.91
VPS29YHR012W YGL149WP53116 101 aa3.11□□□□□ -1.91
VPS29YHR012W AIM11P87275 137 aa3.11□□□□□ -1.91
VPS29YHR012W ABF2Q02486 183 aa3.11□□□□□ -1.91
VPS29YHR012W ELC1Q03071 99 aa3.11□□□□□ -1.91
VPS29YHR012W YNR077CP53758 84 aa3.1□□□□□ -1.91
VPS29YHR012W IGO2Q9P305 131 aa3.1□□□□□ -1.91
VPS29YHR012W COX14P39103 70 aa3.09□□□□□ -1.91
VPS29YHR012W YFR057WP43625 151 aa3.09□□□□□ -1.91
VPS29YHR012W YLR296WQ05898 108 aa3.09□□□□□ -1.91
VPS29YHR012W YKL023C-AQ2V2P3 75 aa3.09□□□□□ -1.91
VPS29YHR012W YIL102C-AQ2V2P5 75 aa3.09□□□□□ -1.91
VPS29YHR012W KTI11Q3E840 82 aa3.09□□□□□ -1.91
VPS29YHR012W PAI3P01094 68 aa3.08□□□□□ -1.92
VPS29YHR012W YBL039W-BP0C268 59 aa3.08□□□□□ -1.92
VPS29YHR012W TOA2P32774 122 aa3.08□□□□□ -1.92
VPS29YHR012W YER181CP40097 107 aa3.08□□□□□ -1.92
VPS29YHR012W PEX17P40155 199 aa3.08□□□□□ -1.92
VPS29YHR012W YNL198CP40166 100 aa3.08□□□□□ -1.92
VPS29YHR012W EOS1P53938 366 aa3.08□□□□□ -1.92
VPS29YHR012W RPL28P02406 149 aaKnown RBP3.07□□□□□ -1.92
VPS29YHR012W RPL18AP0CX49 186 aaKnown RBP3.07□□□□□ -1.92
VPS29YHR012W RPL18BP0CX50 186 aaKnown RBP3.07□□□□□ -1.92
VPS29YHR012W CDC43P18898 376 aa3.07□□□□□ -1.92
VPS29YHR012W SHU1P38751 150 aa3.07□□□□□ -1.92
VPS29YHR012W MVB12P42939 101 aa3.07□□□□□ -1.92
VPS29YHR012W KNH1P50112 268 aa3.07□□□□□ -1.92
VPS29YHR012W YGL193CP53097 103 aa3.07□□□□□ -1.92
VPS29YHR012W MRPS12P53732 153 aa3.07□□□□□ -1.92
VPS29YHR012W CMC4Q3E7A9 73 aa3.07□□□□□ -1.92
VPS29YHR012W YBR182C-AQ8TGU6 64 aa3.07□□□□□ -1.92
VPS29YHR012W ADH1P00330 348 aaKnown RBP3.06□□□□□ -1.92
VPS29YHR012W QCR8P08525 94 aa3.06□□□□□ -1.92
VPS29YHR012W YER039C-AP0CD97 72 aa3.06□□□□□ -1.92
VPS29YHR012W UGX2P32772 223 aa3.06□□□□□ -1.92
VPS29YHR012W POP7P38291 140 aa3.05□□□□□ -1.92
VPS29YHR012W YLR156WP0CE96 114 aa3.04□□□□□ -1.92
VPS29YHR012W YLR159WP0CE97 114 aa3.04□□□□□ -1.92
VPS29YHR012W YLR161WP0CE98 114 aa3.04□□□□□ -1.92
VPS29YHR012W CPR1P14832 162 aaKnown RBP3.04□□□□□ -1.92
VPS29YHR012W UBC4P15731 148 aa3.04□□□□□ -1.92
VPS29YHR012W YNL190WP53872 204 aa3.04□□□□□ -1.92
VPS29YHR012W LSM6Q06406 86 aaKnown RBP3.04□□□□□ -1.92
VPS29YHR012W YNL162W-AQ3E7A8 72 aa3.04□□□□□ -1.92
VPS29YHR012W NHP2P32495 156 aaPredicted RBP3.03□□□□□ -1.92
VPS29YHR012W MID2P36027 376 aa3.03□□□□□ -1.92
VPS29YHR012W YOR268CQ08734 132 aa3.03□□□□□ -1.92
VPS29YHR012W EDC2P40023 145 aaPredicted RBP3.02□□□□□ -1.93
VPS29YHR012W UBC11P52492 156 aa3.02□□□□□ -1.93
VPS29YHR012W KSH1Q8TGJ3 72 aa3.02□□□□□ -1.93
VPS29YHR012W RPL29P05747 59 aaPredicted RBP3.01□□□□□ -1.93
VPS29YHR012W YHR130CP38834 111 aa3.01□□□□□ -1.93
VPS29YHR012W SPG1P50088 95 aa3.01□□□□□ -1.93
VPS29YHR012W YIA6P40556 373 aa3□□□□□ -1.93
VPS29YHR012W IGD1P43598 195 aa3□□□□□ -1.93
VPS29YHR012W YGR121W-AQ3E816 71 aa3□□□□□ -1.93
VPS29YHR012W RPL26AP05743 127 aaKnown RBP2.99□□□□□ -1.93
VPS29YHR012W RPL26BP53221 127 aaKnown RBP2.99□□□□□ -1.93
VPS29YHR012W RGM1Q00453 211 aa2.99□□□□□ -1.93
VPS29YHR012W MRPL24P36525 258 aaPredicted RBP2.98□□□□□ -1.93
VPS29YHR012W YJR085CP47131 105 aaKnown RBP2.98□□□□□ -1.93
VPS29YHR012W DDR2P89113 61 aa2.98□□□□□ -1.93
VPS29YHR012W HPA2Q06592 156 aa2.98□□□□□ -1.93
VPS29YHR012W YLL006W-AQ3E814 58 aa2.98□□□□□ -1.93
VPS29YHR012W YOR020W-AQ3E824 90 aa2.98□□□□□ -1.93
VPS29YHR012W COX10P21592 462 aa2.97□□□□□ -1.93
VPS29YHR012W SPT4P32914 102 aaPredicted RBP2.97□□□□□ -1.93
VPS29YHR012W RUB1Q03919 77 aa2.97□□□□□ -1.93
VPS29YHR012W HUR1P45820 110 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms