RNA–Protein interactions for RNA: YHL025W

SNF6, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SNF6, Length 999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF6YHL025W RPL11BQ3E757 174 aaPredicted RBP7.92□□□□□ -1.14
SNF6YHL025W YAL064WP39711 94 aa7.91□□□□□ -1.14
SNF6YHL025W YKL023C-AQ2V2P3 75 aa7.91□□□□□ -1.14
SNF6YHL025W RRT15Q3E811 62 aa7.91□□□□□ -1.14
SNF6YHL025W YBL081WP38180 368 aaKnown RBP7.9□□□□□ -1.14
SNF6YHL025W UIP3P39547 235 aa7.9□□□□□ -1.14
SNF6YHL025W CWP2P43497 92 aa7.9□□□□□ -1.14
SNF6YHL025W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.9□□□□□ -1.14not detected
SNF6YHL025W YER181CP40097 107 aa7.89□□□□□ -1.15
SNF6YHL025W YLR296WQ05898 108 aa7.89□□□□□ -1.15
SNF6YHL025W PAI3P01094 68 aa7.88□□□□□ -1.15
SNF6YHL025W YAR023CD6VPM8 179 aa7.86□□□□□ -1.15
SNF6YHL025W MBF1O14467 151 aaKnown RBP7.86□□□□□ -1.15
SNF6YHL025W CDC43P18898 376 aa7.86□□□□□ -1.15
SNF6YHL025W YPR170W-BP0C5R9 85 aa7.85□□□□□ -1.15
SNF6YHL025W MID2P36027 376 aa7.85□□□□□ -1.15
SNF6YHL025W UBC11P52492 156 aa7.84□□□□□ -1.15
SNF6YHL025W YIL102C-AQ2V2P5 75 aa7.84□□□□□ -1.15
SNF6YHL025W YLL006W-AQ3E814 58 aa7.84□□□□□ -1.15
SNF6YHL025W POP7P38291 140 aa7.83□□□□□ -1.16
SNF6YHL025W AQY2P0CD90 149 aa7.81□□□□□ -1.16
SNF6YHL025W YIA6P40556 373 aa7.81□□□□□ -1.16
SNF6YHL025W ABF2Q02486 183 aa7.81□□□□□ -1.16
SNF6YHL025W YPR195CQ06594 109 aa7.8□□□□□ -1.16
SNF6YHL025W YOR020W-AQ3E824 90 aa7.8□□□□□ -1.16
SNF6YHL025W MVB12P42939 101 aa7.79□□□□□ -1.16
SNF6YHL025W RGM1Q00453 211 aa7.79□□□□□ -1.16
SNF6YHL025W SMD1Q02260 146 aaPredicted RBP7.79□□□□□ -1.16
SNF6YHL025W LSM6Q06406 86 aaKnown RBP7.79□□□□□ -1.16
SNF6YHL025W NHP2P32495 156 aaPredicted RBP7.78□□□□□ -1.16
SNF6YHL025W YHR130CP38834 111 aa7.78□□□□□ -1.16
SNF6YHL025W SNA2P56508 79 aa7.78□□□□□ -1.16
SNF6YHL025W HPA2Q06592 156 aa7.77□□□□□ -1.17
SNF6YHL025W RPL29P05747 59 aaPredicted RBP7.76□□□□□ -1.17
SNF6YHL025W YNL198CP40166 100 aa7.76□□□□□ -1.17
SNF6YHL025W YFL019CP43576 117 aa7.76□□□□□ -1.17
SNF6YHL025W YBL039W-BP0C268 59 aa7.75□□□□□ -1.17
SNF6YHL025W CPR1P14832 162 aaKnown RBP7.75□□□□□ -1.17
SNF6YHL025W ANB1P19211 157 aa7.75□□□□□ -1.17
SNF6YHL025W MET32Q12041 191 aa7.74□□□□□ -1.17
SNF6YHL025W YDR029WQ12111 104 aa7.74□□□□□ -1.17
SNF6YHL025W YPL229WQ99395 206 aa7.74□□□□□ -1.17
SNF6YHL025W STF1P01098 86 aa7.73□□□□□ -1.17
SNF6YHL025W COX10P21592 462 aa7.73□□□□□ -1.17
SNF6YHL025W EOS1P53938 366 aa7.73□□□□□ -1.17
SNF6YHL025W MRP10O75012 95 aa7.72□□□□□ -1.17
SNF6YHL025W ARO2P28777 376 aaKnown RBP7.72□□□□□ -1.17
SNF6YHL025W TMA7Q3E764 64 aaKnown RBP7.72□□□□□ -1.17
SNF6YHL025W YDR034C-AP0C289 58 aa7.71□□□□□ -1.18
SNF6YHL025W HYP2P23301 157 aaKnown RBP7.71□□□□□ -1.18
SNF6YHL025W KNH1P50112 268 aa7.71□□□□□ -1.18
SNF6YHL025W ISU2Q12056 156 aa7.71□□□□□ -1.18
SNF6YHL025W AIM19P40502 157 aa7.7□□□□□ -1.18
SNF6YHL025W YGL041C-BQ3E750 60 aa7.7□□□□□ -1.18
SNF6YHL025W IRC21Q04772 201 aa7.68□□□□□ -1.18
SNF6YHL025W SMP1P38128 452 aa7.67□□□□□ -1.18
SNF6YHL025W Q0032Q9ZZX7 96 aa7.67□□□□□ -1.18
SNF6YHL025W UBC4P15731 148 aa7.66□□□□□ -1.18
SNF6YHL025W MRPL24P36525 258 aaPredicted RBP7.66□□□□□ -1.18
SNF6YHL025W IGD1P43598 195 aa7.66□□□□□ -1.18
SNF6YHL025W ICY1Q04329 127 aa7.66□□□□□ -1.18
SNF6YHL025W ECM12O13529 151 aa7.65□□□□□ -1.18
SNF6YHL025W HUR1P45820 110 aa7.65□□□□□ -1.18
SNF6YHL025W YNL162W-AQ3E7A8 72 aa7.65□□□□□ -1.18
SNF6YHL025W PEX22P39718 180 aa7.64□□□□□ -1.19
SNF6YHL025W RPL26AP05743 127 aaKnown RBP7.63□□□□□ -1.19
SNF6YHL025W RPL26BP53221 127 aaKnown RBP7.63□□□□□ -1.19
SNF6YHL025W GIS2P53849 153 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
SNF6YHL025W DUT1P33317 147 aa7.61□□□□□ -1.19
SNF6YHL025W YOR034C-AQ3E735 80 aa7.61□□□□□ -1.19
SNF6YHL025W YLR236CA0A023PZG4 107 aa7.6□□□□□ -1.19
SNF6YHL025W LCL2Q08045 131 aa7.6□□□□□ -1.19
SNF6YHL025W YLR307C-AQ3E825 87 aa7.6□□□□□ -1.19
SNF6YHL025W GAT4P40569 121 aa7.59□□□□□ -1.19
SNF6YHL025W MSA2P36157 363 aa7.55□□□□□ -1.2
SNF6YHL025W YGL193CP53097 103 aa7.55□□□□□ -1.2
SNF6YHL025W YNL042W-BQ3E7Z2 85 aa7.54□□□□□ -1.2
SNF6YHL025W YBR230W-AQ3E762 66 aa7.53□□□□□ -1.2
SNF6YHL025W FYV5P25585 152 aa7.52□□□□□ -1.21
SNF6YHL025W YJL127C-BQ3E828 52 aa7.52□□□□□ -1.21
SNF6YHL025W SAP30P38429 201 aa7.51□□□□□ -1.21
SNF6YHL025W MPC3P53311 146 aa7.5□□□□□ -1.21
SNF6YHL025W YPL257WQ08974 193 aa7.5□□□□□ -1.21
SNF6YHL025W DSE2P38844 325 aa7.49□□□□□ -1.21
SNF6YHL025W LCL1Q02786 101 aa7.49□□□□□ -1.21
SNF6YHL025W YER039C-AP0CD97 72 aa7.48□□□□□ -1.21
SNF6YHL025W SPT4P32914 102 aaPredicted RBP7.46□□□□□ -1.22
SNF6YHL025W YJR107C-AP0CT86 78 aa7.45□□□□□ -1.22
SNF6YHL025W SFT1P43682 97 aa7.45□□□□□ -1.22
SNF6YHL025W RPA12P32529 125 aaKnown RBP7.44□□□□□ -1.22
SNF6YHL025W DDR2P89113 61 aa7.44□□□□□ -1.22
SNF6YHL025W YLR156WP0CE96 114 aa7.42□□□□□ -1.22
SNF6YHL025W YLR159WP0CE97 114 aa7.42□□□□□ -1.22
SNF6YHL025W YLR161WP0CE98 114 aa7.42□□□□□ -1.22
SNF6YHL025W BET1P22804 142 aa7.4□□□□□ -1.22
SNF6YHL025W OST2P46964 130 aa7.4□□□□□ -1.22
SNF6YHL025W TSC3Q3E790 80 aa7.39□□□□□ -1.23
SNF6YHL025W MMS2P53152 137 aa7.38□□□□□ -1.23
SNF6YHL025W ATX1P38636 73 aa7.37□□□□□ -1.23
SNF6YHL025W ATP18P81450 59 aa7.37□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 108.9 ms