RNA–Protein interactions for RNA: YER094C

PUP3, Transcript of Beta 3 subunit of the 20S proteasome, yeastyeast

Gene PUP3, Length 618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP3YER094C YAR023CD6VPM8 179 aa5.48□□□□□ -1.53
PUP3YER094C YBL081WP38180 368 aaKnown RBP5.48□□□□□ -1.53
PUP3YER094C YAL065CO13511 128 aa5.47□□□□□ -1.53
PUP3YER094C MID2P36027 376 aa5.47□□□□□ -1.53
PUP3YER094C PAI3P01094 68 aa5.46□□□□□ -1.54
PUP3YER094C CDC43P18898 376 aa5.46□□□□□ -1.54
PUP3YER094C YER181CP40097 107 aa5.45□□□□□ -1.54
PUP3YER094C CWP2P43497 92 aa5.45□□□□□ -1.54
PUP3YER094C YDL241WQ07738 123 aa5.45□□□□□ -1.54
PUP3YER094C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
PUP3YER094C ISU2Q12056 156 aa5.45□□□□□ -1.54
PUP3YER094C UIP3P39547 235 aa5.44□□□□□ -1.54
PUP3YER094C SNA2P56508 79 aa5.44□□□□□ -1.54
PUP3YER094C YPR195CQ06594 109 aa5.44□□□□□ -1.54
PUP3YER094C YIL002W-AQ3E7Z5 69 aa5.44□□□□□ -1.54
PUP3YER094C YLL006W-AQ3E814 58 aa5.44□□□□□ -1.54
PUP3YER094C AQY2P0CD90 149 aa5.43□□□□□ -1.54
PUP3YER094C ABF2Q02486 183 aa5.43□□□□□ -1.54
PUP3YER094C YKL023C-AQ2V2P3 75 aa5.43□□□□□ -1.54
PUP3YER094C ANB1P19211 157 aa5.42□□□□□ -1.54
PUP3YER094C SMD1Q02260 146 aaPredicted RBP5.42□□□□□ -1.54
PUP3YER094C MBF1O14467 151 aaKnown RBP5.41□□□□□ -1.54
PUP3YER094C YIA6P40556 373 aa5.41□□□□□ -1.54
PUP3YER094C UBC11P52492 156 aa5.41□□□□□ -1.54
PUP3YER094C YLR296WQ05898 108 aa5.41□□□□□ -1.54
PUP3YER094C MVB12P42939 101 aa5.4□□□□□ -1.54
PUP3YER094C MET32Q12041 191 aa5.4□□□□□ -1.54
PUP3YER094C YDR029WQ12111 104 aa5.4□□□□□ -1.54
PUP3YER094C YIL102C-AQ2V2P5 75 aa5.4□□□□□ -1.54
PUP3YER094C POP7P38291 140 aa5.39□□□□□ -1.55
PUP3YER094C SAP30P38429 201 aa5.39□□□□□ -1.55
PUP3YER094C YHR130CP38834 111 aa5.39□□□□□ -1.55
PUP3YER094C YPR170W-BP0C5R9 85 aa5.38□□□□□ -1.55
PUP3YER094C ARO2P28777 376 aaKnown RBP5.38□□□□□ -1.55
PUP3YER094C NHP2P32495 156 aaPredicted RBP5.38□□□□□ -1.55
PUP3YER094C YFL019CP43576 117 aa5.38□□□□□ -1.55
PUP3YER094C LSM6Q06406 86 aaKnown RBP5.38□□□□□ -1.55
PUP3YER094C YOR020W-AQ3E824 90 aa5.38□□□□□ -1.55
PUP3YER094C YBL039W-BP0C268 59 aa5.37□□□□□ -1.55
PUP3YER094C YDR034C-AP0C289 58 aa5.37□□□□□ -1.55
PUP3YER094C EOS1P53938 366 aa5.37□□□□□ -1.55
PUP3YER094C HPA2Q06592 156 aa5.37□□□□□ -1.55
PUP3YER094C TMA7Q3E764 64 aaKnown RBP5.37□□□□□ -1.55
PUP3YER094C MRP10O75012 95 aa5.36□□□□□ -1.55
PUP3YER094C YNL198CP40166 100 aa5.36□□□□□ -1.55
PUP3YER094C RGM1Q00453 211 aa5.36□□□□□ -1.55
PUP3YER094C CPR1P14832 162 aaKnown RBP5.35□□□□□ -1.55
PUP3YER094C Q0032Q9ZZX7 96 aa5.35□□□□□ -1.55
PUP3YER094C RPL29P05747 59 aaPredicted RBP5.34□□□□□ -1.55
PUP3YER094C COX10P21592 462 aa5.34□□□□□ -1.55
PUP3YER094C YGL041C-BQ3E750 60 aa5.34□□□□□ -1.55
PUP3YER094C YPL229WQ99395 206 aa5.34□□□□□ -1.55
PUP3YER094C KNH1P50112 268 aa5.33□□□□□ -1.56
PUP3YER094C ECM12O13529 151 aa5.32□□□□□ -1.56
PUP3YER094C SMP1P38128 452 aa5.32□□□□□ -1.56
PUP3YER094C AIM19P40502 157 aa5.32□□□□□ -1.56
PUP3YER094C HYP2P23301 157 aaKnown RBP5.31□□□□□ -1.56
PUP3YER094C PEX22P39718 180 aa5.31□□□□□ -1.56
PUP3YER094C IGD1P43598 195 aa5.31□□□□□ -1.56
PUP3YER094C IRC21Q04772 201 aa5.31□□□□□ -1.56
PUP3YER094C STF1P01098 86 aa5.3□□□□□ -1.56
PUP3YER094C RPL26AP05743 127 aaKnown RBP5.3□□□□□ -1.56
PUP3YER094C HUR1P45820 110 aa5.3□□□□□ -1.56
PUP3YER094C RPL26BP53221 127 aaKnown RBP5.3□□□□□ -1.56
PUP3YER094C LCL2Q08045 131 aa5.3□□□□□ -1.56
PUP3YER094C YOR034C-AQ3E735 80 aa5.3□□□□□ -1.56
PUP3YER094C MRPL24P36525 258 aaPredicted RBP5.29□□□□□ -1.56
PUP3YER094C SOH1P38633 127 aa5.29□□□□□ -1.56
PUP3YER094C UBC4P15731 148 aa5.28□□□□□ -1.56
PUP3YER094C GAT4P40569 121 aa5.28□□□□□ -1.56
PUP3YER094C ICY1Q04329 127 aa5.28□□□□□ -1.56
PUP3YER094C YNL162W-AQ3E7A8 72 aa5.28□□□□□ -1.56
PUP3YER094C RUB1Q03919 77 aa5.26□□□□□ -1.57
PUP3YER094C YLR236CA0A023PZG4 107 aa5.23□□□□□ -1.57
PUP3YER094C YLR307C-AQ3E825 87 aa5.23□□□□□ -1.57
PUP3YER094C DUT1P33317 147 aa5.22□□□□□ -1.57
PUP3YER094C YBR230W-AQ3E762 66 aa5.22□□□□□ -1.57
PUP3YER094C YNL042W-BQ3E7Z2 85 aa5.22□□□□□ -1.57
PUP3YER094C YJL127C-BQ3E828 52 aa5.22□□□□□ -1.57
PUP3YER094C DSE2P38844 325 aa5.21□□□□□ -1.58
PUP3YER094C YGL193CP53097 103 aa5.21□□□□□ -1.58
PUP3YER094C MPC3P53311 146 aa5.21□□□□□ -1.58
PUP3YER094C FYV5P25585 152 aa5.2□□□□□ -1.58
PUP3YER094C LCL1Q02786 101 aa5.2□□□□□ -1.58
PUP3YER094C YPL257WQ08974 193 aa5.2□□□□□ -1.58
PUP3YER094C MSA2P36157 363 aa5.19□□□□□ -1.58
PUP3YER094C YER039C-AP0CD97 72 aa5.18□□□□□ -1.58
PUP3YER094C MMS2P53152 137 aa5.17□□□□□ -1.58
PUP3YER094C DDR2P89113 61 aa5.17□□□□□ -1.58
PUP3YER094C MDN1Q12019 4910 aaKnown RBP5.17□□□□□ -1.58
PUP3YER094C YLR156WP0CE96 114 aa5.16□□□□□ -1.58
PUP3YER094C YLR159WP0CE97 114 aa5.16□□□□□ -1.58
PUP3YER094C YLR161WP0CE98 114 aa5.16□□□□□ -1.58
PUP3YER094C RPA12P32529 125 aaKnown RBP5.16□□□□□ -1.58
PUP3YER094C SPT4P32914 102 aaPredicted RBP5.16□□□□□ -1.58
PUP3YER094C YJR107C-AP0CT86 78 aa5.15□□□□□ -1.59
PUP3YER094C GIS2P53849 153 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59 RIP-Chip
PUP3YER094C TSC3Q3E790 80 aa5.14□□□□□ -1.59
PUP3YER094C BET1P22804 142 aa5.13□□□□□ -1.59
PUP3YER094C SFT1P43682 97 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms