RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C HAL1Q01766 294 aa4.04□□□□□ -1.76
SEC20YDR498C SGF11Q03067 99 aa4.04□□□□□ -1.76
SEC20YDR498C YLR415CO13578 112 aa4.03□□□□□ -1.76
SEC20YDR498C RPL33AP05744 107 aaKnown RBP4.03□□□□□ -1.76
SEC20YDR498C YRA2P36036 203 aaKnown RBP RIP-Chip data4.03□□□□□ -1.76not detected
SEC20YDR498C RPL33BP41056 107 aaKnown RBP4.03□□□□□ -1.76
SEC20YDR498C YDR115WQ04598 105 aa4.03□□□□□ -1.76
SEC20YDR498C YMR320WQ04897 101 aa4.03□□□□□ -1.76
SEC20YDR498C TOA2P32774 122 aa4.02□□□□□ -1.77
SEC20YDR498C QCR8P08525 94 aa4.01□□□□□ -1.77
SEC20YDR498C HYP2P23301 157 aaKnown RBP4.01□□□□□ -1.77
SEC20YDR498C UBC11P52492 156 aa4.01□□□□□ -1.77
SEC20YDR498C ERI1P62651 68 aaKnown RBP4.01□□□□□ -1.77
SEC20YDR498C LSM6Q06406 86 aaKnown RBP4.01□□□□□ -1.77
SEC20YDR498C ADH1P00330 348 aaKnown RBP4□□□□□ -1.77
SEC20YDR498C YAR029WP39549 74 aa4□□□□□ -1.77
SEC20YDR498C CWP2P43497 92 aa4□□□□□ -1.77
SEC20YDR498C RRT15Q3E811 62 aa4□□□□□ -1.77
SEC20YDR498C YLL006W-AQ3E814 58 aa4□□□□□ -1.77
SEC20YDR498C POP7P38291 140 aa3.99□□□□□ -1.77
SEC20YDR498C YAL064WP39711 94 aa3.99□□□□□ -1.77
SEC20YDR498C ERG28P40030 148 aa3.99□□□□□ -1.77
SEC20YDR498C RPC10P40422 70 aa3.99□□□□□ -1.77
SEC20YDR498C RPR2P40571 144 aa3.99□□□□□ -1.77
SEC20YDR498C ARO2P28777 376 aaKnown RBP3.98□□□□□ -1.77
SEC20YDR498C PBA1Q05778 276 aa3.98□□□□□ -1.77
SEC20YDR498C YOR034C-AQ3E735 80 aa3.98□□□□□ -1.77
SEC20YDR498C ENV10Q99382 181 aa3.98□□□□□ -1.77
SEC20YDR498C MDN1Q12019 4910 aaKnown RBP3.98□□□□□ -1.77
SEC20YDR498C YIA6P40556 373 aa3.97□□□□□ -1.77
SEC20YDR498C RGM1Q00453 211 aa3.97□□□□□ -1.77
SEC20YDR498C YMR175W-AQ3E766 64 aa3.96□□□□□ -1.78
SEC20YDR498C SPC1P46965 94 aa3.95□□□□□ -1.78
SEC20YDR498C EOS1P53938 366 aa3.95□□□□□ -1.78
SEC20YDR498C PPT2Q12036 173 aa3.95□□□□□ -1.78
SEC20YDR498C ANB1P19211 157 aa3.94□□□□□ -1.78
SEC20YDR498C NHP2P32495 156 aaPredicted RBP3.94□□□□□ -1.78
SEC20YDR498C YHR130CP38834 111 aa3.94□□□□□ -1.78
SEC20YDR498C HPA2Q06592 156 aa3.94□□□□□ -1.78
SEC20YDR498C YPL229WQ99395 206 aa3.94□□□□□ -1.78
SEC20YDR498C IGD1P43598 195 aa3.93□□□□□ -1.78
SEC20YDR498C YDL241WQ07738 123 aa3.93□□□□□ -1.78
SEC20YDR498C DSE2P38844 325 aa3.92□□□□□ -1.78
SEC20YDR498C SVP26P38869 228 aa3.92□□□□□ -1.78
SEC20YDR498C MVB12P42939 101 aa3.92□□□□□ -1.78
SEC20YDR498C YLR236CA0A023PZG4 107 aa3.91□□□□□ -1.78
SEC20YDR498C YPR010C-AA5Z2X5 72 aa3.91□□□□□ -1.78
SEC20YDR498C RTC6O14464 93 aa3.91□□□□□ -1.78
SEC20YDR498C RPL29P05747 59 aaPredicted RBP3.91□□□□□ -1.78
SEC20YDR498C COX10P21592 462 aa3.91□□□□□ -1.78
SEC20YDR498C RPA12P32529 125 aaKnown RBP3.91□□□□□ -1.78
SEC20YDR498C SMP1P38128 452 aa3.91□□□□□ -1.78
SEC20YDR498C KNH1P50112 268 aa3.91□□□□□ -1.78
SEC20YDR498C IRC21Q04772 201 aa3.91□□□□□ -1.78
SEC20YDR498C YNL162W-AQ3E7A8 72 aa3.91□□□□□ -1.78
SEC20YDR498C YOR020W-AQ3E824 90 aa3.91□□□□□ -1.78
SEC20YDR498C HUR1P45820 110 aa3.9□□□□□ -1.79
SEC20YDR498C YPR195CQ06594 109 aa3.9□□□□□ -1.79
SEC20YDR498C STF1P01098 86 aa3.89□□□□□ -1.79
SEC20YDR498C AQY2P0CD90 149 aa3.89□□□□□ -1.79
SEC20YDR498C MSA2P36157 363 aa3.89□□□□□ -1.79
SEC20YDR498C MRPL24P36525 258 aaPredicted RBP3.89□□□□□ -1.79
SEC20YDR498C AIM19P40502 157 aa3.89□□□□□ -1.79
SEC20YDR498C OST2P46964 130 aa3.89□□□□□ -1.79
SEC20YDR498C YFL019CP43576 117 aa3.88□□□□□ -1.79
SEC20YDR498C MPC3P53311 146 aa3.88□□□□□ -1.79
SEC20YDR498C RUB1Q03919 77 aa3.88□□□□□ -1.79
SEC20YDR498C ICY1Q04329 127 aa3.88□□□□□ -1.79
SEC20YDR498C YLR307C-AQ3E825 87 aa3.88□□□□□ -1.79
SEC20YDR498C SMD1Q02260 146 aaPredicted RBP3.87□□□□□ -1.79
SEC20YDR498C YAR023CD6VPM8 179 aa3.86□□□□□ -1.79
SEC20YDR498C YBL039W-BP0C268 59 aa3.86□□□□□ -1.79
SEC20YDR498C UBC4P15731 148 aa3.86□□□□□ -1.79
SEC20YDR498C ABF2Q02486 183 aa3.86□□□□□ -1.79
SEC20YDR498C SLO1Q3E784 85 aa3.86□□□□□ -1.79
SEC20YDR498C YDR381C-AQ3E6R5 114 aa3.85□□□□□ -1.79
SEC20YDR498C INO4P13902 151 aa3.84□□□□□ -1.79
SEC20YDR498C PEX22P39718 180 aa3.84□□□□□ -1.79
SEC20YDR498C ATX1P38636 73 aa3.83□□□□□ -1.8
SEC20YDR498C SNA2P56508 79 aa3.83□□□□□ -1.8
SEC20YDR498C YBR230W-AQ3E762 66 aa3.83□□□□□ -1.8
SEC20YDR498C GAT4P40569 121 aa3.81□□□□□ -1.8
SEC20YDR498C YPL257WQ08974 193 aa3.81□□□□□ -1.8
SEC20YDR498C YLR156WP0CE96 114 aa3.8□□□□□ -1.8
SEC20YDR498C YLR159WP0CE97 114 aa3.8□□□□□ -1.8
SEC20YDR498C YLR161WP0CE98 114 aa3.8□□□□□ -1.8
SEC20YDR498C YJR107C-AP0CT86 78 aa3.8□□□□□ -1.8
SEC20YDR498C EDC1P53080 175 aaPredicted RBP3.8□□□□□ -1.8
SEC20YDR498C YDR029WQ12111 104 aa3.8□□□□□ -1.8
SEC20YDR498C YAL063C-AQ3E791 96 aa3.8□□□□□ -1.8
SEC20YDR498C YFR009W-AP0C5M9 85 aa3.79□□□□□ -1.8
SEC20YDR498C PBI2P0CT04 75 aaKnown RBP3.79□□□□□ -1.8
SEC20YDR498C ATP18P81450 59 aa3.79□□□□□ -1.8
SEC20YDR498C FYV5P25585 152 aa3.78□□□□□ -1.8
SEC20YDR498C YFL065CP43539 102 aa3.78□□□□□ -1.8
SEC20YDR498C SKI6P46948 246 aaPredicted RBP3.78□□□□□ -1.8
SEC20YDR498C YGL193CP53097 103 aa3.78□□□□□ -1.8
SEC20YDR498C GIS2P53849 153 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8 RIP-Chip
SEC20YDR498C YPR203WQ08994 102 aa3.78□□□□□ -1.8
SEC20YDR498C YJL127C-BQ3E828 52 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 131.3 ms