RNA–Protein interactions for RNA: YDR229W

IVY1, Transcript of Phospholipid-binding protein that interacts with both Ypt7p and Vps33p, yeast

Gene IVY1, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IVY1	YDR229W	GPI19	Q04082	140 aa		4.77	□□□□□ -1.65
IVY1	YDR229W	FCF1	Q05498	189 aa	Predicted RBP	4.77	□□□□□ -1.65
IVY1	YDR229W	UBC5	P15732	148 aa		4.76	□□□□□ -1.65
IVY1	YDR229W	AUA1	P32450	94 aa		4.76	□□□□□ -1.65
IVY1	YDR229W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
IVY1	YDR229W	NRG2	P38082	220 aa		4.76	□□□□□ -1.65
IVY1	YDR229W	YHR140W	P38842	239 aa		4.76	□□□□□ -1.65
IVY1	YDR229W	YDR029W	Q12111	104 aa		4.76	□□□□□ -1.65
IVY1	YDR229W	YHR139C-A	O13536	103 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	PFY1	P07274	126 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	HMRA2	P0CY13	119 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	YCR022C	P25620	114 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	YKR045C	P36138	183 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	YBL071C	P38185	102 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	YMR141C	P40211	102 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	YLR281C	Q05863	155 aa		4.75	□□□□□ -1.65
IVY1	YDR229W	DSE2	P38844	325 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	TOS6	P48560	102 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	KNH1	P50112	268 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	TIM22	Q12328	207 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	COA3	Q3E7B2	85 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	YLR342W-A	Q3E810	57 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	YOR020W-A	Q3E824	90 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	YFR032C-B	Q8TGU2	87 aa		4.74	□□□□□ -1.65
IVY1	YDR229W	YHL042W	P38729	150 aa		4.73	□□□□□ -1.65
IVY1	YDR229W	YCL021W-A	Q96VH3	125 aa		4.73	□□□□□ -1.65
IVY1	YDR229W	YDL022C-A	P0C5L6	82 aa		4.72	□□□□□ -1.65
IVY1	YDR229W	VTC1	P40046	129 aa	RIP-Chip data	4.72	□□□□□ -1.65	not detected
IVY1	YDR229W	YLR194C	Q05777	254 aa		4.72	□□□□□ -1.65
IVY1	YDR229W	TOM6	P33448	61 aa		4.71	□□□□□ -1.66
IVY1	YDR229W	YPL038W-A	Q3E7B4	63 aa		4.71	□□□□□ -1.66
IVY1	YDR229W	YML100W-A	Q8TGT0	57 aa		4.71	□□□□□ -1.66
IVY1	YDR229W	MRPL38	P35996	138 aa	Predicted RBP	4.7	□□□□□ -1.66
IVY1	YDR229W	SPI1	P40092	148 aa		4.7	□□□□□ -1.66
IVY1	YDR229W	BET1	P22804	142 aa		4.69	□□□□□ -1.66
IVY1	YDR229W	YFL067W	P43537	175 aa		4.69	□□□□□ -1.66
IVY1	YDR229W	YDR274C	P87283	123 aa		4.69	□□□□□ -1.66
IVY1	YDR229W	YOL014W	Q08110	124 aa		4.69	□□□□□ -1.66
IVY1	YDR229W	IRC23	Q08416	157 aa		4.69	□□□□□ -1.66
IVY1	YDR229W	MPC2	P38857	129 aa		4.68	□□□□□ -1.66
IVY1	YDR229W	YGR164W	P53291	111 aa		4.68	□□□□□ -1.66
IVY1	YDR229W	YDR381C-A	Q3E6R5	114 aa		4.68	□□□□□ -1.66
IVY1	YDR229W	TRP1	P00912	224 aa		4.67	□□□□□ -1.66
IVY1	YDR229W	YLR042C	Q07990	161 aa		4.67	□□□□□ -1.66
IVY1	YDR229W	YHR213W	P0CI67	198 aa		4.66	□□□□□ -1.66
IVY1	YDR229W	YCR050C	P25630	102 aa		4.66	□□□□□ -1.66
IVY1	YDR229W	YBL081W	P38180	368 aa	Known RBP	4.66	□□□□□ -1.66
IVY1	YDR229W	AIM19	P40502	157 aa		4.66	□□□□□ -1.66
IVY1	YDR229W	IMP2	P46972	177 aa		4.66	□□□□□ -1.66
IVY1	YDR229W	RRT1	P38192	103 aa		4.65	□□□□□ -1.66
IVY1	YDR229W	RPL42A	P0CX27	106 aa	Known RBP	4.65	□□□□□ -1.67
IVY1	YDR229W	RPL42B	P0CX28	106 aa	Known RBP	4.65	□□□□□ -1.67
IVY1	YDR229W	HOT13	P36078	116 aa		4.65	□□□□□ -1.67
IVY1	YDR229W	MSA2	P36157	363 aa		4.65	□□□□□ -1.67
IVY1	YDR229W	YOR008C-A	Q3E7B9	74 aa		4.65	□□□□□ -1.67
IVY1	YDR229W	TAR1	Q8TGM6	124 aa		4.65	□□□□□ -1.67
IVY1	YDR229W	SVP26	P38869	228 aa		4.64	□□□□□ -1.67
IVY1	YDR229W	GAT4	P40569	121 aa		4.64	□□□□□ -1.67
IVY1	YDR229W	PBA1	Q05778	276 aa		4.64	□□□□□ -1.67
IVY1	YDR229W	EMC6	Q12431	108 aa		4.64	□□□□□ -1.67
IVY1	YDR229W	ATP15	P21306	62 aa		4.63	□□□□□ -1.67
IVY1	YDR229W	YSY6	P38374	65 aa		4.63	□□□□□ -1.67
IVY1	YDR229W	YJR085C	P47131	105 aa	Known RBP	4.63	□□□□□ -1.67
IVY1	YDR229W	YLR156W	P0CE96	114 aa		4.62	□□□□□ -1.67
IVY1	YDR229W	YLR159W	P0CE97	114 aa		4.62	□□□□□ -1.67
IVY1	YDR229W	YLR161W	P0CE98	114 aa		4.62	□□□□□ -1.67
IVY1	YDR229W	YHL018W	P38744	120 aa	Predicted RBP	4.62	□□□□□ -1.67
IVY1	YDR229W	YFL019C	P43576	117 aa		4.62	□□□□□ -1.67
IVY1	YDR229W	SPG1	P50088	95 aa		4.62	□□□□□ -1.67
IVY1	YDR229W	PRM7	Q12459	698 aa		4.62	□□□□□ -1.67
IVY1	YDR229W	RRT13	P40042	185 aa		4.61	□□□□□ -1.67
IVY1	YDR229W	DCV1	P43595	202 aa		4.61	□□□□□ -1.67
IVY1	YDR229W	YNL190W	P53872	204 aa		4.61	□□□□□ -1.67
IVY1	YDR229W	HUR1	P45820	110 aa		4.6	□□□□□ -1.67
IVY1	YDR229W	YJL027C	P47063	138 aa	Predicted RBP	4.6	□□□□□ -1.67
IVY1	YDR229W	MRPS12	P53732	153 aa		4.6	□□□□□ -1.67
IVY1	YDR229W	YDR115W	Q04598	105 aa		4.6	□□□□□ -1.67
IVY1	YDR229W	YPR013C	Q12145	317 aa		4.6	□□□□□ -1.67
IVY1	YDR229W	POR2	P40478	281 aa		4.58	□□□□□ -1.68
IVY1	YDR229W	YNL162W-A	Q3E7A8	72 aa		4.58	□□□□□ -1.68
IVY1	YDR229W	SMD1	Q02260	146 aa	Predicted RBP	4.57	□□□□□ -1.68
IVY1	YDR229W	YMR244W	Q04018	355 aa		4.57	□□□□□ -1.68
IVY1	YDR229W	RDS3	Q06835	107 aa	Predicted RBP	4.57	□□□□□ -1.68
IVY1	YDR229W	YMR175W-A	Q3E766	64 aa		4.57	□□□□□ -1.68
IVY1	YDR229W	YER187W	P40102	141 aa		4.56	□□□□□ -1.68
IVY1	YDR229W	YJR146W	P47174	117 aa		4.56	□□□□□ -1.68
IVY1	YDR229W	MRPS8	Q03799	155 aa		4.56	□□□□□ -1.68
IVY1	YDR229W	CRC1	Q12289	327 aa		4.56	□□□□□ -1.68
IVY1	YDR229W	YHR022C	P38763	256 aa		4.55	□□□□□ -1.68
IVY1	YDR229W	YAR029W	P39549	74 aa		4.55	□□□□□ -1.68
IVY1	YDR229W	YER135C	P40082	130 aa		4.55	□□□□□ -1.68
IVY1	YDR229W	YAR023C	D6VPM8	179 aa		4.54	□□□□□ -1.68
IVY1	YDR229W	QCR8	P08525	94 aa		4.54	□□□□□ -1.68
IVY1	YDR229W	UBC4	P15731	148 aa		4.54	□□□□□ -1.68
IVY1	YDR229W	ARC15	P40518	154 aa	RIP-Chip data	4.54	□□□□□ -1.68	not detected
IVY1	YDR229W	RPR2	P40571	144 aa		4.54	□□□□□ -1.68
IVY1	YDR229W	YFR035C	P43608	114 aa		4.54	□□□□□ -1.68
IVY1	YDR229W	PPT2	Q12036	173 aa		4.54	□□□□□ -1.68
IVY1	YDR229W	KSH1	Q8TGJ3	72 aa		4.54	□□□□□ -1.68
IVY1	YDR229W	YBR209W	P38311	105 aa		4.53	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms