RNA–Protein interactions for RNA: YCL069W

VBA3, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA3, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA3YCL069W YAR023CD6VPM8 179 aa5.72□□□□□ -1.49
VBA3YCL069W RPL28P02406 149 aaKnown RBP5.72□□□□□ -1.49
VBA3YCL069W FUN14P18411 198 aa5.72□□□□□ -1.49
VBA3YCL069W ANB1P19211 157 aa5.72□□□□□ -1.49
VBA3YCL069W MSL1P40567 111 aaPredicted RBP5.72□□□□□ -1.49
VBA3YCL069W YGL230CP53074 147 aa5.72□□□□□ -1.49
VBA3YCL069W BET5Q03630 159 aa5.72□□□□□ -1.49
VBA3YCL069W YLR194CQ05777 254 aa5.72□□□□□ -1.49
VBA3YCL069W DFM1Q12743 341 aaKnown RBP5.72□□□□□ -1.49
VBA3YCL069W YAR029WP39549 74 aa5.71□□□□□ -1.5
VBA3YCL069W RPC10P40422 70 aa5.71□□□□□ -1.5
VBA3YCL069W NAT5Q08689 176 aa5.71□□□□□ -1.5
VBA3YCL069W RPL32P38061 130 aaKnown RBP5.7□□□□□ -1.5
VBA3YCL069W SHU1P38751 150 aa5.7□□□□□ -1.5
VBA3YCL069W YDL157CQ12082 118 aa5.7□□□□□ -1.5
VBA3YCL069W YKR041WP36134 250 aa5.69□□□□□ -1.5
VBA3YCL069W GAT4P40569 121 aa5.68□□□□□ -1.5
VBA3YCL069W YKL044WP36092 106 aa5.67□□□□□ -1.5
VBA3YCL069W YEL067CP39978 195 aa5.67□□□□□ -1.5
VBA3YCL069W UBC11P52492 156 aa5.67□□□□□ -1.5
VBA3YCL069W YMR175W-AQ3E766 64 aa5.67□□□□□ -1.5
VBA3YCL069W YAL065CO13511 128 aa5.67□□□□□ -1.5
VBA3YCL069W YPL073CP40323 161 aa5.67□□□□□ -1.5
VBA3YCL069W ATP5P09457 212 aa5.66□□□□□ -1.5
VBA3YCL069W YER039C-AP0CD97 72 aa5.66□□□□□ -1.5
VBA3YCL069W PBI2P0CT04 75 aaKnown RBP5.66□□□□□ -1.5
VBA3YCL069W YHR130CP38834 111 aa5.66□□□□□ -1.5
VBA3YCL069W COX14P39103 70 aa5.66□□□□□ -1.5
VBA3YCL069W PEX17P40155 199 aa5.66□□□□□ -1.5
VBA3YCL069W LCL2Q08045 131 aa5.66□□□□□ -1.5
VBA3YCL069W YDR034C-AP0C289 58 aa5.65□□□□□ -1.51
VBA3YCL069W VTC1P40046 129 aaRIP-Chip data5.65□□□□□ -1.51not detected
VBA3YCL069W MRPS12P53732 153 aa5.65□□□□□ -1.51
VBA3YCL069W YDL085C-AQ3E7B7 68 aaKnown RBP5.65□□□□□ -1.51
VBA3YCL069W YNR077CP53758 84 aa5.64□□□□□ -1.51
VBA3YCL069W SNA2P56508 79 aa5.64□□□□□ -1.51
VBA3YCL069W COF1Q03048 143 aaKnown RBP5.64□□□□□ -1.51
VBA3YCL069W YLR415CO13578 112 aa5.63□□□□□ -1.51
VBA3YCL069W HAP3P13434 144 aa5.63□□□□□ -1.51
VBA3YCL069W HYP2P23301 157 aaKnown RBP5.63□□□□□ -1.51
VBA3YCL069W YCR007CP25354 239 aa5.63□□□□□ -1.51
VBA3YCL069W TOA2P32774 122 aa5.63□□□□□ -1.51
VBA3YCL069W YNL190WP53872 204 aa5.62□□□□□ -1.51
VBA3YCL069W PPT2Q12036 173 aa5.62□□□□□ -1.51
VBA3YCL069W IGO2Q9P305 131 aa5.62□□□□□ -1.51
VBA3YCL069W ADH1P00330 348 aaKnown RBP5.61□□□□□ -1.51
VBA3YCL069W QCR8P08525 94 aa5.61□□□□□ -1.51
VBA3YCL069W CDC43P18898 376 aa5.61□□□□□ -1.51
VBA3YCL069W YDL241WQ07738 123 aa5.61□□□□□ -1.51
VBA3YCL069W YDR029WQ12111 104 aa5.61□□□□□ -1.51
VBA3YCL069W ISD11Q6Q560 94 aa5.6□□□□□ -1.51
VBA3YCL069W YPL229WQ99395 206 aa5.6□□□□□ -1.51
VBA3YCL069W SMP1P38128 452 aa5.59□□□□□ -1.51
VBA3YCL069W SMD1Q02260 146 aaPredicted RBP5.59□□□□□ -1.51
VBA3YCL069W KTI11Q3E840 82 aa5.59□□□□□ -1.51
VBA3YCL069W YER175W-AQ8TGU4 54 aa5.59□□□□□ -1.51
VBA3YCL069W AQY2P0CD90 149 aa5.58□□□□□ -1.52
VBA3YCL069W MID2P36027 376 aa5.58□□□□□ -1.52
VBA3YCL069W OST2P46964 130 aa5.58□□□□□ -1.52
VBA3YCL069W PEX22P39718 180 aa5.57□□□□□ -1.52
VBA3YCL069W CWP2P43497 92 aa5.57□□□□□ -1.52
VBA3YCL069W SBH1P52870 82 aa5.57□□□□□ -1.52
VBA3YCL069W RAD6P06104 172 aa5.56□□□□□ -1.52
VBA3YCL069W YGR039WP53225 103 aa5.56□□□□□ -1.52
VBA3YCL069W MVB12P42939 101 aa5.55□□□□□ -1.52
VBA3YCL069W PAU23Q07987 124 aa5.55□□□□□ -1.52
VBA3YCL069W PAU17Q12370 124 aa5.55□□□□□ -1.52
VBA3YCL069W YLL006W-AQ3E814 58 aa5.55□□□□□ -1.52
VBA3YCL069W GIS2P53849 153 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
VBA3YCL069W MBF1O14467 151 aaKnown RBP5.54□□□□□ -1.52
VBA3YCL069W YML079WQ03629 201 aa5.54□□□□□ -1.52
VBA3YCL069W YLR412C-AQ3E742 68 aa5.53□□□□□ -1.52
VBA3YCL069W YNL277W-AQ3E7Z0 62 aa5.53□□□□□ -1.52
VBA3YCL069W PAI3P01094 68 aa5.52□□□□□ -1.53
VBA3YCL069W YPR170W-BP0C5R9 85 aa5.52□□□□□ -1.53
VBA3YCL069W YFL019CP43576 117 aa5.52□□□□□ -1.53
VBA3YCL069W YBL039W-BP0C268 59 aa5.51□□□□□ -1.53
VBA3YCL069W IGD1P43598 195 aa5.51□□□□□ -1.53
VBA3YCL069W HPA2Q06592 156 aa5.51□□□□□ -1.53
VBA3YCL069W Q0032Q9ZZX7 96 aa5.51□□□□□ -1.53
VBA3YCL069W ECM12O13529 151 aa5.5□□□□□ -1.53
VBA3YCL069W SFT1P43682 97 aa5.5□□□□□ -1.53
VBA3YCL069W YLR363W-AQ3E747 85 aa5.5□□□□□ -1.53
VBA3YCL069W YGL041C-BQ3E750 60 aa5.5□□□□□ -1.53
VBA3YCL069W YLR307C-AQ3E825 87 aa5.5□□□□□ -1.53
VBA3YCL069W INO4P13902 151 aa5.48□□□□□ -1.53
VBA3YCL069W AIM19P40502 157 aa5.48□□□□□ -1.53
VBA3YCL069W YIA6P40556 373 aa5.48□□□□□ -1.53
VBA3YCL069W SHH4Q06236 168 aa5.48□□□□□ -1.53
VBA3YCL069W COX10P21592 462 aa5.47□□□□□ -1.53
VBA3YCL069W RPL29P05747 59 aaPredicted RBP5.46□□□□□ -1.54
VBA3YCL069W RGM1Q00453 211 aa5.46□□□□□ -1.54
VBA3YCL069W LCL1Q02786 101 aa5.45□□□□□ -1.54
VBA3YCL069W YBL112CQ3E7Y4 105 aa5.45□□□□□ -1.54
VBA3YCL069W YER181CP40097 107 aa5.44□□□□□ -1.54
VBA3YCL069W KNH1P50112 268 aa5.44□□□□□ -1.54
VBA3YCL069W YOR020W-AQ3E824 90 aa5.44□□□□□ -1.54
VBA3YCL069W UBC4P15731 148 aa5.42□□□□□ -1.54
VBA3YCL069W YFL065CP43539 102 aa5.42□□□□□ -1.54
VBA3YCL069W YPR203WQ08994 102 aa5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms