RNA–Protein interactions for RNA: YBR229C

ROT2, Transcript of Glucosidase II catalytic subunit, yeastyeast

Gene ROT2, Length 2,865 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT2YBR229C YCR075W-AQ3E830 75 aa3.61□□□□□ -1.83
ROT2YBR229C YMR122W-AQ3E842 84 aa3.61□□□□□ -1.83
ROT2YBR229C YBR144CP34215 104 aa3.61□□□□□ -1.83
ROT2YBR229C MRPL24P36525 258 aaPredicted RBP3.61□□□□□ -1.83
ROT2YBR229C AIM19P40502 157 aa3.61□□□□□ -1.83
ROT2YBR229C YFL041W-AQ3E817 63 aa3.61□□□□□ -1.83
ROT2YBR229C SVP26P38869 228 aa3.61□□□□□ -1.83
ROT2YBR229C SKI6P46948 246 aaPredicted RBP3.61□□□□□ -1.83
ROT2YBR229C VAM10Q08474 114 aa3.61□□□□□ -1.83
ROT2YBR229C RTG1P32607 177 aa3.6□□□□□ -1.83
ROT2YBR229C YDR274CP87283 123 aa3.6□□□□□ -1.83
ROT2YBR229C COX12Q01519 83 aa3.6□□□□□ -1.83
ROT2YBR229C YDR381C-AQ3E6R5 114 aa3.6□□□□□ -1.83
ROT2YBR229C MSA2P36157 363 aa3.6□□□□□ -1.83
ROT2YBR229C ERI1P62651 68 aaKnown RBP3.6□□□□□ -1.83
ROT2YBR229C YNL184CP53876 108 aa3.59□□□□□ -1.83
ROT2YBR229C MSN1P22148 382 aa3.59□□□□□ -1.84
ROT2YBR229C YLL006W-AQ3E814 58 aa3.59□□□□□ -1.84
ROT2YBR229C ENV10Q99382 181 aa3.58□□□□□ -1.84
ROT2YBR229C TEL1P38110 2787 aa3.58□□□□□ -1.84
ROT2YBR229C YLR236CA0A023PZG4 107 aa3.57□□□□□ -1.84
ROT2YBR229C PBI2P0CT04 75 aaKnown RBP3.57□□□□□ -1.84
ROT2YBR229C MLF3P32047 452 aa3.57□□□□□ -1.84
ROT2YBR229C ERG28P40030 148 aa3.57□□□□□ -1.84
ROT2YBR229C YAL065CO13511 128 aa3.57□□□□□ -1.84
ROT2YBR229C YDL186WP48568 277 aa3.57□□□□□ -1.84
ROT2YBR229C RDS3Q06835 107 aaPredicted RBP3.57□□□□□ -1.84
ROT2YBR229C PBA1Q05778 276 aa3.57□□□□□ -1.84
ROT2YBR229C YDL241WQ07738 123 aa3.57□□□□□ -1.84
ROT2YBR229C YPL229WQ99395 206 aa3.57□□□□□ -1.84
ROT2YBR229C YMR175W-AQ3E766 64 aa3.56□□□□□ -1.84
ROT2YBR229C YHR139C-AO13536 103 aa3.56□□□□□ -1.84
ROT2YBR229C YCR001WP25347 104 aa3.56□□□□□ -1.84
ROT2YBR229C YAR1P46683 200 aa3.56□□□□□ -1.84
ROT2YBR229C HAL1Q01766 294 aa3.56□□□□□ -1.84
ROT2YBR229C CRC1Q12289 327 aa3.56□□□□□ -1.84
ROT2YBR229C PRP8P33334 2413 aaKnown RBP3.55□□□□□ -1.84
ROT2YBR229C IRC21Q04772 201 aa3.55□□□□□ -1.84
ROT2YBR229C YOR034C-AQ3E735 80 aa3.55□□□□□ -1.84
ROT2YBR229C YGR035W-AQ45U48 73 aa3.55□□□□□ -1.84
ROT2YBR229C RPL29P05747 59 aaPredicted RBP3.54□□□□□ -1.84
ROT2YBR229C KNH1P50112 268 aa3.54□□□□□ -1.84
ROT2YBR229C RPC10P40422 70 aa3.53□□□□□ -1.84
ROT2YBR229C ICY1Q04329 127 aa3.53□□□□□ -1.84
ROT2YBR229C YPR010C-AA5Z2X5 72 aa3.53□□□□□ -1.84
ROT2YBR229C MEC1P38111 2368 aa3.53□□□□□ -1.84
ROT2YBR229C YOR304C-AO14468 76 aa3.53□□□□□ -1.85
ROT2YBR229C YJR107C-AP0CT86 78 aa3.53□□□□□ -1.85
ROT2YBR229C SHH4Q06236 168 aa3.53□□□□□ -1.85
ROT2YBR229C YDR119W-AQ2V2P9 66 aa3.53□□□□□ -1.85
ROT2YBR229C SMP1P38128 452 aa3.52□□□□□ -1.85
ROT2YBR229C SGF11Q03067 99 aa3.52□□□□□ -1.85
ROT2YBR229C RPL33AP05744 107 aaKnown RBP3.52□□□□□ -1.85
ROT2YBR229C RPL33BP41056 107 aaKnown RBP3.52□□□□□ -1.85
ROT2YBR229C YMR320WQ04897 101 aa3.52□□□□□ -1.85
ROT2YBR229C EMC6Q12431 108 aa3.51□□□□□ -1.85
ROT2YBR229C YHL042WP38729 150 aa3.51□□□□□ -1.85
ROT2YBR229C MVB12P42939 101 aa3.51□□□□□ -1.85
ROT2YBR229C MPC3P53311 146 aa3.5□□□□□ -1.85
ROT2YBR229C GAT4P40569 121 aa3.5□□□□□ -1.85
ROT2YBR229C YGR039WP53225 103 aa3.5□□□□□ -1.85
ROT2YBR229C COF1Q03048 143 aaKnown RBP3.5□□□□□ -1.85
ROT2YBR229C ATP18P81450 59 aa3.49□□□□□ -1.85
ROT2YBR229C RAD6P06104 172 aa3.49□□□□□ -1.85
ROT2YBR229C YFL019CP43576 117 aa3.49□□□□□ -1.85
ROT2YBR229C SMD1Q02260 146 aaPredicted RBP3.49□□□□□ -1.85
ROT2YBR229C YPL080CQ02826 108 aa3.49□□□□□ -1.85
ROT2YBR229C YBL039W-BP0C268 59 aa3.48□□□□□ -1.85
ROT2YBR229C SPC1P46965 94 aa3.48□□□□□ -1.85
ROT2YBR229C YPL038W-AQ3E7B4 63 aa3.48□□□□□ -1.85
ROT2YBR229C AQY2P0CD90 149 aa3.48□□□□□ -1.85
ROT2YBR229C YBL081WP38180 368 aaKnown RBP3.48□□□□□ -1.85
ROT2YBR229C YAL064WP39711 94 aa3.48□□□□□ -1.85
ROT2YBR229C UBC4P15731 148 aa3.47□□□□□ -1.85
ROT2YBR229C YSY6P38374 65 aa3.47□□□□□ -1.85
ROT2YBR229C YNL162W-AQ3E7A8 72 aa3.47□□□□□ -1.85
ROT2YBR229C YBL112CQ3E7Y4 105 aa3.47□□□□□ -1.85
ROT2YBR229C YDR115WQ04598 105 aa3.47□□□□□ -1.85
ROT2YBR229C YLR281CQ05863 155 aa3.47□□□□□ -1.85
ROT2YBR229C STF1P01098 86 aa3.46□□□□□ -1.85
ROT2YBR229C RPL26AP05743 127 aaKnown RBP3.46□□□□□ -1.85
ROT2YBR229C YCL042WP25572 119 aa3.46□□□□□ -1.85
ROT2YBR229C RPL26BP53221 127 aaKnown RBP3.46□□□□□ -1.85
ROT2YBR229C RSM19P53733 91 aaPredicted RBP3.46□□□□□ -1.85
ROT2YBR229C YIR021W-AQ3E739 70 aa3.46□□□□□ -1.85
ROT2YBR229C TSC3Q3E790 80 aa3.45□□□□□ -1.86
ROT2YBR229C YLL066W-BQ8TGJ7 56 aa3.45□□□□□ -1.86
ROT2YBR229C DIF1O13577 133 aa3.45□□□□□ -1.86
ROT2YBR229C YFR009W-AP0C5M9 85 aa3.45□□□□□ -1.86
ROT2YBR229C YHL018WP38744 120 aaPredicted RBP3.45□□□□□ -1.86
ROT2YBR229C CUP1-1P0CX80 61 aa3.44□□□□□ -1.86
ROT2YBR229C CUP1-2P0CX81 61 aa3.44□□□□□ -1.86
ROT2YBR229C TOM6P33448 61 aa3.44□□□□□ -1.86
ROT2YBR229C IGD1P43598 195 aa3.44□□□□□ -1.86
ROT2YBR229C SFT1P43682 97 aa3.44□□□□□ -1.86
ROT2YBR229C EDC1P53080 175 aaPredicted RBP3.44□□□□□ -1.86
ROT2YBR229C YDR029WQ12111 104 aa3.44□□□□□ -1.86
ROT2YBR229C YLR285C-AQ3E771 56 aa3.44□□□□□ -1.86
ROT2YBR229C YLR307C-AQ3E825 87 aa3.44□□□□□ -1.86
ROT2YBR229C RTC6O14464 93 aa3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms