RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C YBR219CP38317 127 aa5.07□□□□□ -1.6
TDP1YBR223C CWP2P43497 92 aa5.07□□□□□ -1.6
TDP1YBR223C HUR1P45820 110 aa5.07□□□□□ -1.6
TDP1YBR223C ERI1P62651 68 aaKnown RBP5.07□□□□□ -1.6
TDP1YBR223C COX12Q01519 83 aa5.07□□□□□ -1.6
TDP1YBR223C VAM10Q08474 114 aa5.07□□□□□ -1.6
TDP1YBR223C MLF3P32047 452 aa5.05□□□□□ -1.6
TDP1YBR223C TOA2P32774 122 aa5.05□□□□□ -1.6
TDP1YBR223C MRPL24P36525 258 aaPredicted RBP5.05□□□□□ -1.6
TDP1YBR223C RPR2P40571 144 aa5.05□□□□□ -1.6
TDP1YBR223C RGM1Q00453 211 aa5.05□□□□□ -1.6
TDP1YBR223C ENV10Q99382 181 aa5.05□□□□□ -1.6
TDP1YBR223C CUP1-1P0CX80 61 aa5.05□□□□□ -1.6
TDP1YBR223C CUP1-2P0CX81 61 aa5.05□□□□□ -1.6
TDP1YBR223C YCR085WP25650 117 aa5.05□□□□□ -1.6
TDP1YBR223C YFL065CP43539 102 aa5.05□□□□□ -1.6
TDP1YBR223C YPR203WQ08994 102 aa5.05□□□□□ -1.6
TDP1YBR223C AIM19P40502 157 aa5.04□□□□□ -1.6
TDP1YBR223C CRC1Q12289 327 aa5.04□□□□□ -1.6
TDP1YBR223C YOR020W-AQ3E824 90 aa5.04□□□□□ -1.6
TDP1YBR223C UBC11P52492 156 aa5.03□□□□□ -1.6
TDP1YBR223C YLL006W-AQ3E814 58 aa5.02□□□□□ -1.61
TDP1YBR223C SVP26P38869 228 aa5.01□□□□□ -1.61
TDP1YBR223C HAL1Q01766 294 aa5.01□□□□□ -1.61
TDP1YBR223C PBI2P0CT04 75 aaKnown RBP5.01□□□□□ -1.61
TDP1YBR223C ERG28P40030 148 aa5.01□□□□□ -1.61
TDP1YBR223C SGF11Q03067 99 aa5.01□□□□□ -1.61
TDP1YBR223C YOR034C-AQ3E735 80 aa5.01□□□□□ -1.61
TDP1YBR223C YMR175W-AQ3E766 64 aa5.01□□□□□ -1.61
TDP1YBR223C PBA1Q05778 276 aa5□□□□□ -1.61
TDP1YBR223C YAL063C-AQ3E791 96 aa5□□□□□ -1.61
TDP1YBR223C YPL229WQ99395 206 aa5□□□□□ -1.61
TDP1YBR223C YAL065CO13511 128 aa4.99□□□□□ -1.61
TDP1YBR223C SKI6P46948 246 aaPredicted RBP4.99□□□□□ -1.61
TDP1YBR223C KNH1P50112 268 aa4.97□□□□□ -1.61
TDP1YBR223C YPR010C-AA5Z2X5 72 aa4.97□□□□□ -1.61
TDP1YBR223C MSA2P36157 363 aa4.97□□□□□ -1.61
TDP1YBR223C SMD1Q02260 146 aaPredicted RBP4.97□□□□□ -1.61
TDP1YBR223C YMR320WQ04897 101 aa4.97□□□□□ -1.61
TDP1YBR223C RDS3Q06835 107 aaPredicted RBP4.97□□□□□ -1.61
TDP1YBR223C YDL241WQ07738 123 aa4.97□□□□□ -1.61
TDP1YBR223C YFL041W-AQ3E817 63 aa4.97□□□□□ -1.61
TDP1YBR223C RPP2AP05319 106 aaKnown RBP4.96□□□□□ -1.62
TDP1YBR223C YNL184CP53876 108 aa4.96□□□□□ -1.62
TDP1YBR223C IRC21Q04772 201 aa4.96□□□□□ -1.62
TDP1YBR223C YLR236CA0A023PZG4 107 aa4.95□□□□□ -1.62
TDP1YBR223C RPC10P40422 70 aa4.95□□□□□ -1.62
TDP1YBR223C YLR281CQ05863 155 aa4.95□□□□□ -1.62
TDP1YBR223C YDR381C-AQ3E6R5 114 aa4.95□□□□□ -1.62
TDP1YBR223C RPL33AP05744 107 aaKnown RBP4.94□□□□□ -1.62
TDP1YBR223C KRE1P17260 313 aa4.94□□□□□ -1.62
TDP1YBR223C RPL33BP41056 107 aaKnown RBP4.94□□□□□ -1.62
TDP1YBR223C YHR139C-AO13536 103 aa4.94□□□□□ -1.62
TDP1YBR223C YAL064WP39711 94 aa4.94□□□□□ -1.62
TDP1YBR223C MVB12P42939 101 aa4.94□□□□□ -1.62
TDP1YBR223C RPL29P05747 59 aaPredicted RBP4.93□□□□□ -1.62
TDP1YBR223C YJR107C-AP0CT86 78 aa4.93□□□□□ -1.62
TDP1YBR223C YAR1P46683 200 aa4.93□□□□□ -1.62
TDP1YBR223C SPC1P46965 94 aa4.93□□□□□ -1.62
TDP1YBR223C ICY1Q04329 127 aa4.93□□□□□ -1.62
TDP1YBR223C AIR2Q12476 344 aaKnown RBP4.93□□□□□ -1.62
TDP1YBR223C NUM1Q00402 2748 aa4.91□□□□□ -1.62
TDP1YBR223C DIF1O13577 133 aa4.91□□□□□ -1.62
TDP1YBR223C AQY2P0CD90 149 aa4.91□□□□□ -1.62
TDP1YBR223C MPC3P53311 146 aa4.91□□□□□ -1.62
TDP1YBR223C YBL081WP38180 368 aaKnown RBP4.9□□□□□ -1.62
TDP1YBR223C YFL019CP43576 117 aa4.9□□□□□ -1.63
TDP1YBR223C EMC6Q12431 108 aa4.9□□□□□ -1.63
TDP1YBR223C RAD6P06104 172 aa4.89□□□□□ -1.63
TDP1YBR223C YBL039W-BP0C268 59 aa4.89□□□□□ -1.63
TDP1YBR223C YGR039WP53225 103 aa4.89□□□□□ -1.63
TDP1YBR223C RPL26AP05743 127 aaKnown RBP4.88□□□□□ -1.63
TDP1YBR223C RPL26BP53221 127 aaKnown RBP4.88□□□□□ -1.63
TDP1YBR223C YDR115WQ04598 105 aa4.88□□□□□ -1.63
TDP1YBR223C ATP18P81450 59 aa4.87□□□□□ -1.63
TDP1YBR223C COF1Q03048 143 aaKnown RBP4.87□□□□□ -1.63
TDP1YBR223C YLR122CQ12312 125 aa4.87□□□□□ -1.63
TDP1YBR223C RTC6O14464 93 aa4.86□□□□□ -1.63
TDP1YBR223C SMP1P38128 452 aa4.86□□□□□ -1.63
TDP1YBR223C YHL042WP38729 150 aa4.86□□□□□ -1.63
TDP1YBR223C TSC3Q3E790 80 aa4.86□□□□□ -1.63
TDP1YBR223C YOR304C-AO14468 76 aa4.85□□□□□ -1.63
TDP1YBR223C UBC4P15731 148 aa4.85□□□□□ -1.63
TDP1YBR223C YNL162W-AQ3E7A8 72 aa4.85□□□□□ -1.63
TDP1YBR223C RRT15Q3E811 62 aa4.85□□□□□ -1.63
TDP1YBR223C YLL066W-BQ8TGJ7 56 aa4.85□□□□□ -1.63
TDP1YBR223C YAR023CD6VPM8 179 aa4.83□□□□□ -1.64
TDP1YBR223C YDR119W-AQ2V2P9 66 aa4.83□□□□□ -1.64
TDP1YBR223C YBL112CQ3E7Y4 105 aa4.83□□□□□ -1.64
TDP1YBR223C SNA2P56508 79 aa4.83□□□□□ -1.64
TDP1YBR223C FYV5P25585 152 aa4.82□□□□□ -1.64
TDP1YBR223C SHH4Q06236 168 aa4.82□□□□□ -1.64
TDP1YBR223C Q0032Q9ZZX7 96 aa4.82□□□□□ -1.64
TDP1YBR223C STF1P01098 86 aa4.81□□□□□ -1.64
TDP1YBR223C YFR009W-AP0C5M9 85 aa4.81□□□□□ -1.64
TDP1YBR223C IGD1P43598 195 aa4.81□□□□□ -1.64
TDP1YBR223C YLR285C-AQ3E771 56 aa4.81□□□□□ -1.64
TDP1YBR223C YJL127C-BQ3E828 52 aa4.81□□□□□ -1.64
TDP1YBR223C YSY6P38374 65 aa4.8□□□□□ -1.64
TDP1YBR223C GAT4P40569 121 aa4.8□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms