RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 PKDCCQ504Y2 493 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 STXBP5Q5T5C0 1151 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 GPR158Q5T848 1215 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 FAM71AQ8IYT1 594 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 NEK11Q8NG66 645 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 SCAMP5Q8TAC9 235 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 SLITRK1Q96PX8 696 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 UBXN6Q9BZV1 441 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 SLITRK6Q9H5Y7 841 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 ZMYM5Q9UJ78 669 aa21.45■■□□□ 1.02
PTCD3-220ENST00000627371 FAM92AA1XBS5 289 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 SOBPA7XYQ1 873 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 ANHXE9PGG2 379 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 F8VZ95 297 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 CYP26A1O43174 497 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 PNMA6AP0CW24 399 aaPredicted RBP21.44■■□□□ 1.02
PTCD3-220ENST00000627371 SETSIPP0DME0 302 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 PPP3CCP48454 512 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 POLR2FP61218 127 aaKnown RBP21.44■■□□□ 1.02
PTCD3-220ENST00000627371 PDE4CQ08493 712 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 TAF10Q12962 218 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 HTR4Q13639 388 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 MTSS1LQ765P7 747 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 GPRIN1Q7Z2K8 1008 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 OVCA2Q8WZ82 227 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 MRPS31Q92665 395 aaKnown RBP21.44■■□□□ 1.02
PTCD3-220ENST00000627371 FBXO32Q969P5 355 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 NXPE3Q969Y0 559 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 ZSWIM3Q96MP5 696 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 ASB16Q96NS5 453 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 FBXO44Q9H4M3 255 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 TASP1Q9H6P5 420 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 ACP6Q9NPH0 428 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 IGSF9Q9P2J2 1179 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 NCANO14594 1321 aa21.44■■□□□ 1.02
PTCD3-220ENST00000627371 A0A1W2PQC6 194 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 M0QYV0 167 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 XPO1O14980 1071 aaKnown RBP21.43■■□□□ 1.02
PTCD3-220ENST00000627371 THAP12O43422 761 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 MED7O43513 233 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 CLCN1P35523 988 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 PTK2Q05397 1052 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 NR1I3Q14994 352 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 MEA1Q16626 185 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 PIGZQ86VD9 579 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 RNF214Q8ND24 703 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 PDZD8Q8NEN9 1154 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 UBA3Q8TBC4 463 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 ZSCAN18Q8TBC5 510 aaPredicted RBP21.43■■□□□ 1.02
PTCD3-220ENST00000627371 ZNF606Q8WXB4 792 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 KCNK12Q9HB15 430 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 TRPM5Q9NZQ8 1165 aa21.43■■□□□ 1.02
PTCD3-220ENST00000627371 ASGR2P07307 311 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 WEE1P30291 646 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 PLA2G4AP47712 749 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 KIF11P52732 1056 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 UBASH3AP57075 661 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 JAM2P57087 298 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 FAM78AQ5JUQ0 283 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 PARM1Q6UWI2 310 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 FGF14Q92915 247 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 SMARCD2Q92925 531 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 TRPV4Q9HBA0 871 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 NLRC4Q9NPP4 1024 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 NUMBLQ9Y6R0 609 aa21.42■■□□□ 1.02
PTCD3-220ENST00000627371 ZNF840PA6NDX5 716 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 TULP2O00295 520 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 FCARP24071 287 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 BPIFB4P59827 614 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 PTPN21Q16825 1174 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 RAB41Q5JT25 222 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 TXNDC8Q6A555 127 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 SLC47A2Q86VL8 602 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 MON1AQ86VX9 555 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 MAB21L3Q8N8X9 362 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 SLC35F5Q8WV83 523 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 SECISBP2LQ93073 1101 aaKnown RBP21.41■■□□□ 1.02
PTCD3-220ENST00000627371 SPAG5Q96R06 1193 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 SLC46A2Q9BY10 475 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 MUTYHQ9UIF7 546 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 SCML2Q9UQR0 700 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 USP3Q9Y6I4 520 aa21.41■■□□□ 1.02
PTCD3-220ENST00000627371 KIF26AQ9ULI4 1882 aaPredicted RBP21.41■■□□□ 1.02
PTCD3-220ENST00000627371 TNFRSF10AO00220 468 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 ECI2O75521 394 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 PFKLP17858 780 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 SNX30Q5VWJ9 437 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 CMTM8Q8IZV2 173 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 ST13P5Q8NFI4 369 aaPredicted RBP21.4■■□□□ 1.02
PTCD3-220ENST00000627371 RSAD2Q8WXG1 361 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 KCTD13Q8WZ19 329 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 ELSPBP1Q96BH3 223 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 ZFP14Q9HCL3 533 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 GMIPQ9P107 970 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 PCDHGC3Q9UN70 934 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 SORCS3Q9UPU3 1222 aa21.4■■□□□ 1.02
PTCD3-220ENST00000627371 ZDHHC11BP0C7U3 371 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 SOX5P35711 763 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 GPD2P43304 727 aa21.39■■□□□ 1.01
PTCD3-220ENST00000627371 TDGQ13569 410 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms