RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 A0A1W2PQ27 194 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 A0A1W2PQ64 194 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 A0A1W2PQD8 194 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 LEFTY2O00292 366 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 CLDN5O00501 218 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 SCAMP3O14828 347 aaKnown RBP11.89□□□□□ -0.51
TARDBP-221ENST00000619555 TRIM66O15016 1216 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 ABL1P00519 1130 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 FAM163BP0C2L3 166 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 TCF3P15923 654 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 NDUFA8P51970 172 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 SNRPFP62306 86 aaKnown RBP11.89□□□□□ -0.51
TARDBP-221ENST00000619555 TNNC1P63316 161 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 TAF10Q12962 218 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 NR1H3Q13133 447 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 TRPC3Q13507 836 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 SF3A2Q15428 464 aaKnown RBP11.89□□□□□ -0.51
TARDBP-221ENST00000619555 BMT2Q1RMZ1 405 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 FBXO43Q4G163 708 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 CAMKK1Q8N5S9 505 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 EXOC4Q96A65 974 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 ELMO3Q96BJ8 720 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 CEP295NLQ96MC4 621 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 B3GNT5Q9BYG0 378 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 XYLT2Q9H1B5 865 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 SMPD4Q9NXE4 827 aa11.89□□□□□ -0.51
TARDBP-221ENST00000619555 NXF1Q9UBU9 619 aaKnown RBP11.89□□□□□ -0.51
TARDBP-221ENST00000619555 PVALEFA0A1B0GWK0 134 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 A8MXQ7 604 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 DCLK1O15075 740 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 EXOC3O60645 756 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 PHACTR2O75167 634 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 EPN2O95208 641 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 NFATC1O95644 943 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 STAU1O95793 577 aaKnown RBP11.88□□□□□ -0.51
TARDBP-221ENST00000619555 OPRD1P41143 372 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 PDE6CP51160 858 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 CDH8P55286 799 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 NOP14P78316 857 aaKnown RBP11.88□□□□□ -0.51
TARDBP-221ENST00000619555 SLC7A9P82251 487 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 IFRD2Q12894 506 aaPredicted RBP11.88□□□□□ -0.51
TARDBP-221ENST00000619555 DMC1Q14565 340 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 KNOP1Q1ED39 458 aaKnown RBP11.88□□□□□ -0.51
TARDBP-221ENST00000619555 GAB4Q2WGN9 574 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 PPM1JQ5JR12 505 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 TDRD10Q5VZ19 366 aaKnown RBP11.88□□□□□ -0.51
TARDBP-221ENST00000619555 SYT13Q7L8C5 426 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 FILIP1Q7Z7B0 1213 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 C12orf56Q8IXR9 622 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 LOXL4Q96JB6 756 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 CNTNAP3BQ96NU0 1288 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 CNTNAP3Q9BZ76 1288 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 SMOC1Q9H4F8 434 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 SMYD3Q9H7B4 428 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 MAGEF1Q9HAY2 307 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 RXFP3Q9NSD7 469 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 CPQQ9Y646 472 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 KIAA1549LQ6ZVL6 1849 aa11.88□□□□□ -0.51
TARDBP-221ENST00000619555 K7EQS6 105 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 KLRC4O43908 158 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 AKAP3O75969 853 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 APBB3O95704 486 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 OLFM2O95897 454 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 CYP17A1P05093 508 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 PRR29P0C7W0 189 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 ZNF806P0C7X5 589 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 PFKLP17858 780 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 ATICP31939 592 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 SLC6A11P48066 632 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 PPP3CCP48454 512 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 SEC13P55735 322 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 STK4Q13043 487 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 BIRC3Q13489 604 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 PLK5Q496M5 336 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 AASDHQ4L235 1098 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-221ENST00000619555 C2orf27AQ580R0 203 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 ADGRG2Q8IZP9 1017 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 B3GALNT2Q8NCR0 500 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 USP33Q8TEY7 942 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 SYAP1Q96A49 352 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-221ENST00000619555 ZC3H10Q96K80 434 aaKnown RBP11.87□□□□□ -0.51
TARDBP-221ENST00000619555 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
TARDBP-221ENST00000619555 KCNK16Q96T55 309 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 ELOVL4Q9GZR5 314 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 DUSP15Q9H1R2 295 aaPredicted RBP11.87□□□□□ -0.51
TARDBP-221ENST00000619555 EHD2Q9NZN4 543 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 CFAP97Q9P2B7 532 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 CGNQ9P2M7 1197 aaKnown RBP11.87□□□□□ -0.51
TARDBP-221ENST00000619555 INVSQ9Y283 1065 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 MYH10P35580 1976 aa11.87□□□□□ -0.51
TARDBP-221ENST00000619555 CEP295Q9C0D2 2601 aa11.86□□□□□ -0.51
TARDBP-221ENST00000619555 LRRIQ3A6PVS8 624 aaPredicted RBP11.86□□□□□ -0.51
TARDBP-221ENST00000619555 FOXD2O60548 495 aaPredicted RBP11.86□□□□□ -0.51
TARDBP-221ENST00000619555 GADD45BO75293 160 aaPredicted RBP11.86□□□□□ -0.51
TARDBP-221ENST00000619555 CLSTN1O94985 981 aa11.86□□□□□ -0.51
TARDBP-221ENST00000619555 VNN1O95497 513 aa11.86□□□□□ -0.51
TARDBP-221ENST00000619555 OAS1P00973 400 aaKnown RBP11.86□□□□□ -0.51
TARDBP-221ENST00000619555 C4BPAP04003 597 aaKnown RBP11.86□□□□□ -0.51
TARDBP-221ENST00000619555 ADRB1P08588 477 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms