RNA–Protein interactions for RNA: ENST00000603621.1

TUBE1-204, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-204ENST00000603621 NDRG2Q9UN36 371 aaKnown RBP15.27■□□□□ 0.04
TUBE1-204ENST00000603621 PIAS3Q9Y6X2 628 aa15.27■□□□□ 0.04
TUBE1-204ENST00000603621 PATJQ8NI35 1801 aa15.27■□□□□ 0.03
TUBE1-204ENST00000603621 ZNF840PA6NDX5 716 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 SOBPA7XYQ1 873 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 H0Y858 1186 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 GALR2O43603 387 aaPredicted RBP15.26■□□□□ 0.03
TUBE1-204ENST00000603621 AFPP02771 609 aaKnown RBP15.26■□□□□ 0.03
TUBE1-204ENST00000603621 SOX9P48436 509 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 RAD23BP54727 409 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 TNK2Q07912 1038 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 TCF15Q12870 199 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 DPCR1Q3MIW9 517 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 TRIM68Q6AZZ1 485 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
TUBE1-204ENST00000603621 CLEC20AQ6ZU45 233 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 TRIM59Q8IWR1 403 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 TTC39CQ8N584 583 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 DTWD2Q8NBA8 298 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 SLC4A11Q8NBS3 891 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 GPT2Q8TD30 523 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 NT5C1BQ96P26 610 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 MED15Q96RN5 788 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 DDX23Q9BUQ8 820 aaKnown RBP15.26■□□□□ 0.03
TUBE1-204ENST00000603621 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 LTB4R2Q9NPC1 389 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 GKN1Q9NS71 199 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 GTSE1Q9NYZ3 720 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 GCNT4Q9P109 453 aa15.26■□□□□ 0.03
TUBE1-204ENST00000603621 ARIH1Q9Y4X5 557 aaPredicted RBP15.26■□□□□ 0.03
TUBE1-204ENST00000603621 ATG2BQ96BY7 2078 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 ARNTLO00327 626 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 MAN2B1O00754 1011 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 TNFRSF10BO14763 440 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 TARSP26639 723 aaKnown RBP15.25■□□□□ 0.03
TUBE1-204ENST00000603621 PPP3CCP48454 512 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 PTPN5P54829 565 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 YWHAEP62258 255 aaKnown RBP15.25■□□□□ 0.03
TUBE1-204ENST00000603621 PLCB2Q00722 1185 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 CCDC105Q8IYK2 499 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 PPM1KQ8N3J5 372 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 RIN3Q8TB24 985 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 FAM3CQ92520 227 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 CNOT6LQ96LI5 555 aaKnown RBP15.25■□□□□ 0.03
TUBE1-204ENST00000603621 RNF38Q9H0F5 515 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 CSNK1G1Q9HCP0 422 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 TRPV5Q9NQA5 729 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 GMIPQ9P107 970 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 MRPS17Q9Y2R5 130 aaKnown RBP15.25■□□□□ 0.03
TUBE1-204ENST00000603621 CACNA1IQ9P0X4 2223 aa15.25■□□□□ 0.03
TUBE1-204ENST00000603621 MBL2P11226 248 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-204ENST00000603621 GLULP15104 373 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 CD19P15391 556 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 TBXAS1P24557 533 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-204ENST00000603621 PLA2G5P39877 138 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 MTIF2P46199 727 aaKnown RBP15.24■□□□□ 0.03
TUBE1-204ENST00000603621 PDE6CP51160 858 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 NUBP1P53384 320 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 MARSP56192 900 aaKnown RBP15.24■□□□□ 0.03
TUBE1-204ENST00000603621 NHLH1Q02575 133 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 ZNF268Q14587 947 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-204ENST00000603621 MTF1Q14872 753 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 HSP90AA4PQ58FG1 418 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 RRAGAQ7L523 313 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 GPRIN1Q7Z2K8 1008 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 EHBP1Q8NDI1 1231 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 PDZD8Q8NEN9 1154 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 SH3RF2Q8TEC5 729 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 ATOH1Q92858 354 aaPredicted RBP15.24■□□□□ 0.03
TUBE1-204ENST00000603621 KAT5Q92993 513 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 FAM86C1Q9NVL1 165 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 SMPD4Q9NXE4 827 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 PCDHB4Q9Y5E5 795 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 MYOFQ9NZM1 2061 aa15.24■□□□□ 0.03
TUBE1-204ENST00000603621 SHISA7A6NL88 538 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 SPECC1L-ADORA2AF8WAN1 911 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 PMM2O15305 246 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 NCAM2O15394 837 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 P4HA2O15460 535 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 ARSAP15289 507 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 ACO1P21399 889 aaKnown RBP15.23■□□□□ 0.03
TUBE1-204ENST00000603621 ZNF77Q15935 545 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 ITPRIPL2Q3MIP1 535 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 ARHGEF19Q8IW93 802 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 LMO3Q8TAP4 145 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 OVCA2Q8WZ82 227 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 NELL2Q99435 816 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 FAM83CQ9BQN1 747 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 CRACR2AQ9BSW2 395 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 DUSP16Q9BY84 665 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 FBXO44Q9H4M3 255 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 C8orf33Q9H7E9 229 aaPredicted RBP15.23■□□□□ 0.03
TUBE1-204ENST00000603621 COMMD8Q9NX08 183 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 DUS2Q9NX74 493 aaKnown RBP15.23■□□□□ 0.03
TUBE1-204ENST00000603621 DLGAP2Q9P1A6 1054 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 DACH1Q9UI36 760 aa15.23■□□□□ 0.03
TUBE1-204ENST00000603621 ARHGAP26Q9UNA1 814 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms