RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 CPA6Q8N4T0 437 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 RUBCNQ92622 972 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 ATP2A3Q93084 1043 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 EXOC4Q96A65 974 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 ELMO3Q96BJ8 720 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 SMARCD1Q96GM5 515 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 FAXDC2Q96IV6 333 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 IMPG2Q9BZV3 1241 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 ECT2Q9H8V3 914 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 CYP3A43Q9HB55 503 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 TMEM8AQ9HCN3 771 aa19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 DMAP1Q9NPF5 467 aaPredicted RBP19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 HELZP42694 1942 aaKnown RBP19.04■□□□□ 0.64
CHMP2A-203ENST00000597209 TNFRSF10BO14763 440 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 OAS1P00973 400 aaKnown RBP19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 TRIM49P0CI25 452 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 TRIM49CP0CI26 452 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 TRIM21P19474 475 aaKnown RBP19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 GCLMP48507 274 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 NDST1P52848 882 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 INCA1Q0VD86 236 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 GRSF1Q12849 480 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 EML3Q32P44 896 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 SNX30Q5VWJ9 437 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 SPOPLQ6IQ16 392 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 Q6ZS52 159 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 ELOA2Q8IYF1 753 aaPredicted RBP19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 FUKQ8N0W3 1084 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 KCNK16Q96T55 309 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 MED10Q9BTT4 135 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 CSNK1G1Q9HCP0 422 aa19.03■□□□□ 0.64
CHMP2A-203ENST00000597209 FAM92AA1XBS5 289 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 CETN3O15182 167 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 SMC2O95347 1197 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 HOXA6P31267 233 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 GJA4P35212 333 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 ZXDBP98169 803 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 NR1H3Q13133 447 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 KRT39Q6A163 491 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 FSTL4Q6MZW2 842 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 SMYD4Q8IYR2 804 aaPredicted RBP19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 TAS1R2Q8TE23 839 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 RNF38Q9H0F5 515 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 APOBEC3GQ9HC16 384 aaKnown RBP19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 HOOK1Q9UJC3 728 aaKnown RBP19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 WNT6Q9Y6F9 365 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 VPS13AQ96RL7 3174 aa19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 PTPRZ1P23471 2315 aaPredicted RBP19.02■□□□□ 0.64
CHMP2A-203ENST00000597209 K7ESF4 209 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 LEFTY2O00292 366 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 STX10O60499 249 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 AP1G2O75843 785 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 DRD1P21728 446 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 PRCPP42785 496 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 GALK1P51570 392 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 ZC3H3Q8IXZ2 948 aaKnown RBP19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 CCDC150Q8NCX0 1101 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 FBXO32Q969P5 355 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 SMOQ99835 787 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 P2RY13Q9BPV8 354 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 NIF3L1Q9GZT8 377 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 HMGXB4Q9UGU5 601 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 PCDHA5Q9Y5H7 936 aa19.01■□□□□ 0.63
CHMP2A-203ENST00000597209 CHURC1-FNTBB4DL54 471 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 ATG13O75143 517 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 CILPO75339 1184 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 NFATC1O95644 943 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 ZDHHC11BP0C7U3 371 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 EPB41P11171 864 aaKnown RBP19■□□□□ 0.63
CHMP2A-203ENST00000597209 CNR2P34972 360 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 TUBP50607 506 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 SLC5A3P53794 718 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 FBXO43Q4G163 708 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 DDX42Q86XP3 938 aaKnown RBP eCLIP19■□□□□ 0.63
CHMP2A-203ENST00000597209 ZMIZ2Q8NF64 920 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 SLC2A14Q8TDB8 520 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 SMARCE1Q969G3 411 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 HNRNPABQ99729 332 aaKnown RBP19■□□□□ 0.63
CHMP2A-203ENST00000597209 TSG101Q99816 390 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 NT5C1AQ9BXI3 368 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 DNAI2Q9GZS0 605 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 LINC00597Q9H2U6 94 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 FAM124BQ9H5Z6 455 aaPredicted RBP19■□□□□ 0.63
CHMP2A-203ENST00000597209 KRT82Q9NSB4 513 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 CPQQ9Y646 472 aa19■□□□□ 0.63
CHMP2A-203ENST00000597209 SLC9A3R1O14745 358 aaPredicted RBP18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 SLC16A3O15427 465 aaKnown RBP18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 ABL1P00519 1130 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 CCDC130P13994 396 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 FKBP3Q00688 224 aaKnown RBP18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 IFRD2Q12894 506 aaPredicted RBP18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 LONP2Q86WA8 852 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 TTC39CQ8N584 583 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 C12orf29Q8N999 325 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 SCAMP5Q8TAC9 235 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 WHAMMQ8TF30 809 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 CD101Q93033 1021 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 TWNKQ96RR1 684 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 FBXO44Q9H4M3 255 aa18.99■□□□□ 0.63
CHMP2A-203ENST00000597209 FBRSL1Q9HCM7 1045 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms