RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 ABL1P00519 1130 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 CKMP06732 381 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 HDCP19113 662 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 SLC9A1P19634 815 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 ACO1P21399 889 aaKnown RBP18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 VITQ6UXI7 678 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 ZMIZ2Q8NF64 920 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 DNASE1L2Q92874 299 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 TDP1Q9NUW8 608 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 FANCLQ9NW38 375 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 APEX2Q9UBZ4 518 aa18.27■□□□□ 0.52
SHKBP1-212ENST00000596163 NCANO14594 1321 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 SMTNL1A8MU46 457 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 CHADO15335 359 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 TADA3O75528 432 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 BEST1O76090 585 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 CDK11BP21127 795 aaKnown RBP18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 RFX1P22670 979 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 PON1P27169 355 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 GDI1P31150 447 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 PLCB2Q00722 1185 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 GRM2Q14416 872 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 ARHGAP29Q52LW3 1261 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 CDKAL1Q5VV42 579 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 SIX5Q8N196 739 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 FBXL6Q8N531 539 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 RBBP8NLQ8NC74 664 aaPredicted RBP18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 SCAMP5Q8TAC9 235 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 BPIFB1Q8TDL5 484 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 KAT5Q92993 513 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 TRPV5Q9NQA5 729 aa18.26■□□□□ 0.51
SHKBP1-212ENST00000596163 FAM92AA1XBS5 289 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 STK25O00506 426 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 KRT5P13647 590 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 BCAT1P54687 386 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 PRKCQQ04759 706 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 FCHO2Q0JRZ9 810 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 CNGA2Q16280 664 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 GOLGA7BQ2TAP0 167 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 ANO6Q4KMQ2 910 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 SLC44A4Q53GD3 710 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 MIIPQ5JXC2 388 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 FKBP15Q5T1M5 1219 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 HFE2Q6ZVN8 426 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 GPIHBP1Q8IV16 184 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 KREMEN1Q96MU8 473 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 BPIFA3Q9BQP9 254 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 ARHGEF3Q9NR81 526 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 TLR8Q9NR97 1041 aaKnown RBP18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 CHORDC1Q9UHD1 332 aaPredicted RBP18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 TSPAN16Q9UKR8 245 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 CA14Q9ULX7 337 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 CNTN6Q9UQ52 1028 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 MYO10Q9HD67 2058 aa18.25■□□□□ 0.51
SHKBP1-212ENST00000596163 PRAMEF12O95522 483 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 BST2Q10589 180 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 HECTD3Q5T447 861 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 SNX30Q5VWJ9 437 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 CC2D1AQ6P1N0 951 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 LCLAT1Q6UWP7 414 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 ARL14EPQ8N8R7 260 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 CSGALNACT1Q8TDX6 532 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 USP13Q92995 863 aaPredicted RBP18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 CYP2S1Q96SQ9 504 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 SMG9Q9H0W8 520 aaKnown RBP18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 TAB2Q9NYJ8 693 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 SCML2Q9UQR0 700 aa18.24■□□□□ 0.51
SHKBP1-212ENST00000596163 C2orf78A6NCI8 922 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 HHLA1C9JL84 531 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 RNF225M0QZC1 329 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 O00370 1275 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 XPO1O14980 1071 aaKnown RBP18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 MED7O43513 233 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 SETSIPP0DME0 302 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 PSEN1P49768 467 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 TUBP50607 506 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 KIF11P52732 1056 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 ZNF132P52740 706 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 KRT31Q15323 416 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 MLF2Q15773 248 aaPredicted RBP18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 ARHGAP44Q17R89 818 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 RSPRY1Q96DX4 576 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 VPS16Q9H269 839 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 ARHGAP26Q9UNA1 814 aa18.23■□□□□ 0.51
SHKBP1-212ENST00000596163 ZDHHC11BP0C7U3 371 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 GLULP15104 373 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 TCF3P15923 654 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 USP8P40818 1118 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 CLCN5P51795 746 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 MLLT6P55198 1093 aaPredicted RBP18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 SLC7A9P82251 487 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 PDE4CQ08493 712 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 TADA2BQ86TJ2 420 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 PIGZQ86VD9 579 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 TTC30AQ86WT1 665 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 DDX42Q86XP3 938 aaKnown RBP eCLIP18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 ARHGAP18Q8N392 663 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 AOPEPQ8N6M6 819 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 FLCNQ8NFG4 579 aa18.22■□□□□ 0.51
SHKBP1-212ENST00000596163 NACA2Q9H009 215 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms