RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 OLFML1Q6UWY5 402 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 KDM7AQ6ZMT4 941 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 TTC30AQ86WT1 665 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 PSTKQ8IV42 348 aaKnown RBP10.89□□□□□ -0.67
VPS25-203ENST00000589520 ARFGAP1Q8N6T3 406 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 C12orf29Q8N999 325 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 SLC35B2Q8TB61 432 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 KBTBD7Q8WVZ9 684 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 RIN2Q8WYP3 895 aaPredicted RBP10.89□□□□□ -0.67
VPS25-203ENST00000589520 CCDC77Q9BR77 488 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 DUSP16Q9BY84 665 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 PCDH9Q9HC56 1237 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 KLK14Q9P0G3 267 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 DDX20Q9UHI6 824 aaKnown RBP10.89□□□□□ -0.67
VPS25-203ENST00000589520 DSEQ9UL01 958 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 CITO14578 2027 aa10.89□□□□□ -0.67
VPS25-203ENST00000589520 A0A0U1RQF3 1178 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 CFAP69A5D8W1 941 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 APOC4-APOC2K7ER74 178 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 PTGESO14684 152 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 SHOX2O60902 331 aaPredicted RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 FBXO21O94952 628 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 APOC2P02655 101 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 IVLP07476 585 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 PRKAR2AP13861 404 aaKnown RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 CAPN2P17655 700 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 PTPN1P18031 435 aaKnown RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 TGM2P21980 687 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 PCSK1P29120 753 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 ATP5DP30049 168 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 ACTN2P35609 894 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 FLT3P36888 993 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 THPOP40225 353 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 LMAN1P49257 510 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 ZNF844Q08AG5 666 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 ITGA7Q13683 1181 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 MORF4L2Q15014 288 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 OASLQ15646 514 aaKnown RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 CCDC14Q49A88 953 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 TTMPQ5BVD1 217 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 KAZNQ674X7 775 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 C4orf22Q6V702 233 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 STRADAQ7RTN6 431 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 EMC1Q8N766 993 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 B3GALNT2Q8NCR0 500 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 ARRDC4Q8NCT1 418 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 CENPIQ92674 756 aaPredicted RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 ARL8AQ96BM9 186 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 PGM2Q96G03 612 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 TTC25Q96NG3 672 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 CAPS2Q9BXY5 557 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 ARHGAP39Q9C0H5 1083 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 ZWILCHQ9H900 591 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 CNOT10Q9H9A5 744 aaKnown RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 PPCSQ9HAB8 311 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 CDH9Q9ULB4 789 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 TPX2Q9ULW0 747 aaKnown RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 NOD1Q9Y239 953 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 R3HDM2Q9Y2K5 976 aaKnown RBP10.88□□□□□ -0.67
VPS25-203ENST00000589520 PTCH2Q9Y6C5 1203 aa10.88□□□□□ -0.67
VPS25-203ENST00000589520 SCN10AQ9Y5Y9 1956 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 PI4K2BG5E9Z4 385 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 MCF2LO15068 1137 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 SPTLC1O15269 473 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 INPPL1O15357 1258 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 PAPSS1O43252 624 aaPredicted RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 RIPK2O43353 540 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 CST8O60676 142 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 TCEA3O75764 348 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 EOMESO95936 686 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 FGFR1P11362 822 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 COL6A1P12109 1028 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 KRT10P13645 584 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 NR1D1P20393 614 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 IL1R2P27930 398 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 MAP2K2P36507 400 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 ARSEP51690 589 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 ITGA8P53708 1063 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 SOX4Q06945 474 aaPredicted RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 GRIK3Q13003 919 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 KRT81Q14533 505 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 DSC3Q14574 896 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 KRT71Q3SY84 523 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 HABP4Q5JVS0 413 aaKnown RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 DAB2IPQ5VWQ8 1189 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 HIBCHQ6NVY1 386 aaPredicted RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 DSTYKQ6XUX3 929 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 BZW1Q7L1Q6 419 aaKnown RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 METTL23Q86XA0 190 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 RFX6Q8HWS3 928 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 ZCCHC9Q8N567 271 aaKnown RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.87□□□□□ -0.67
VPS25-203ENST00000589520 RSAD2Q8WXG1 361 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 ATG4AQ8WYN0 398 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 HAUS1Q96CS2 278 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 SENP8Q96LD8 212 aa10.87□□□□□ -0.67
VPS25-203ENST00000589520 GLT1D1Q96MS3 346 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms