RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TMLHEQ9NVH6 421 aa11.98□□□□□ -0.49
SMAD4-205ENST00000588745 KRIT1O00522 736 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 RHOXF2BP0C7M4 288 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 TCF4P15884 667 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 PDGFRAP16234 1089 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 DESP17661 470 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 EN2P19622 333 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 SDC4P31431 198 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 PBX3P40426 434 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 DEFB103AP81534 67 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 SLC25A11Q02978 314 aaKnown RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 TAF5Q15542 800 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 HADHQ16836 314 aaKnown RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 RAB41Q5JT25 222 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 CCDC70Q6NSX1 233 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 LRRTM3Q86VH5 581 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 TMEM173Q86WV6 379 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 SLC13A5Q86YT5 568 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 DCP1BQ8IZD4 617 aaKnown RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 EXD1Q8NHP7 514 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 BCL7CQ8WUZ0 217 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 KHSRPQ92945 711 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■■■□ 19.6
SMAD4-205ENST00000588745 ZNF689Q96CS4 500 aaPredicted RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 RBM41Q96IZ5 413 aaKnown RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 RHOXF2Q9BQY4 288 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 AP1M1Q9BXS5 423 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 RHOBTB2Q9BYZ6 727 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 GPR62Q9BZJ7 368 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 EPC1Q9H2F5 836 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 CWH43Q9H720 699 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 PNPLA8Q9NP80 782 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 TMEM30AQ9NV96 361 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 ASNSD1Q9NWL6 643 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 DDX56Q9NY93 547 aaKnown RBP11.97□□□□□ -0.49
SMAD4-205ENST00000588745 PTPRSQ13332 1948 aa11.97□□□□□ -0.49
SMAD4-205ENST00000588745 GOLGA6L10A0A0M3HER8 536 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 TARSL2A2RTX5 802 aaKnown RBP11.96□□□□□ -0.49
SMAD4-205ENST00000588745 OR6C75A6NL08 312 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 NT5C1B-RDH14C9J2C7 533 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 HHLA1C9JL84 531 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 SART1O43290 800 aaKnown RBP11.96□□□□□ -0.49
SMAD4-205ENST00000588745 HSF2BPO75031 334 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 DAB1O75553 588 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 RNF8O76064 485 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 FBXO21O94952 628 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 KRT1P04264 644 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 KRT7P08729 469 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 OR4Q2P0C623 313 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 ACRP10323 421 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 BDNFP23560 247 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 PCK1P35558 622 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 PTPN9P43378 593 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 TKTL1P51854 596 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 CDR1P51861 262 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 MRPS5P82675 430 aaKnown RBP11.96□□□□□ -0.49
SMAD4-205ENST00000588745 MRPL58Q14197 206 aaKnown RBP11.96□□□□□ -0.49
SMAD4-205ENST00000588745 CCDC14Q49A88 953 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 CTXN3Q4LDR2 81 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 EFHC1Q5JVL4 640 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 C8orf74Q6P047 294 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 GPRIN1Q7Z2K8 1008 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 CEP57Q86XR8 500 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 SPATA2LQ8IUW3 424 aaPredicted RBP11.96□□□□□ -0.49
SMAD4-205ENST00000588745 CCDC50Q8IVM0 306 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 CMTR2Q8IYT2 770 aaKnown RBP11.96□□□□□ -0.49
SMAD4-205ENST00000588745 ARFGAP1Q8N6T3 406 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 KCNK16Q96T55 309 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 KRT12Q99456 494 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 CNGB3Q9NQW8 809 aa11.96□□□□□ -0.49
SMAD4-205ENST00000588745 COL4A4P53420 1690 aaPredicted RBP11.96□□□□□ -0.5
SMAD4-205ENST00000588745 H7C4K7 107 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 ZRANB2O95218 330 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 EFEMP2O95967 443 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 GLI1P08151 1106 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 MIPP30301 263 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 ALDH7A1P49419 539 aaKnown RBP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 RABGGTBP53611 331 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 DAOAP59103 153 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 PPIGQ13427 754 aaKnown RBP eCLIP11.95□□□□□ -0.58e-6■■■■□ 22.7
SMAD4-205ENST00000588745 SMC1AQ14683 1233 aaKnown RBP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 NFE2Q16621 373 aaPredicted RBP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 CDO1Q16878 200 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 C15orf59Q2T9L4 293 aaPredicted RBP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 SLC39A12Q504Y0 691 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 GLE1Q53GS7 698 aaKnown RBP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 RTP2Q5QGT7 225 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 TXNRD3NBQ6F5E7 133 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 FUBP3Q96I24 572 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 B3GALT6Q96L58 329 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 CFAP57Q96MR6 1250 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 PNKPQ96T60 521 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 NCAPGQ9BPX3 1015 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 LRRC1Q9BTT6 524 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 C11orf84Q9BUA3 381 aaPredicted RBP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 OXCT2Q9BYC2 517 aaPredicted RBP11.95□□□□□ -0.5
SMAD4-205ENST00000588745 PARD6BQ9BYG5 372 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 ULBP1Q9BZM6 244 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 KLHL11Q9NVR0 708 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 PRKAG2Q9UGJ0 569 aa11.95□□□□□ -0.5
SMAD4-205ENST00000588745 KIAA1671Q9BY89 1806 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms