RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 TAF10Q12962 218 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 USP4Q13107 963 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 TTC39CQ8N584 583 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 ATRIPQ8WXE1 791 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 ELMO3Q96BJ8 720 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 SLC22A12Q96S37 553 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 NIF3L1Q9GZT8 377 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 EBF3Q9H4W6 596 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 MMRN2Q9H8L6 949 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 HPS4Q9NQG7 708 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 ZSCAN32Q9NX65 697 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 DUS2Q9NX74 493 aaKnown RBP24.76■■□□□ 1.55
LSM7-204ENST00000587502 ANAPC1Q9H1A4 1944 aa24.76■■□□□ 1.55
LSM7-204ENST00000587502 KIF26AQ9ULI4 1882 aaPredicted RBP24.75■■□□□ 1.55
LSM7-204ENST00000587502 AP1G2O75843 785 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 IFNAR2P48551 515 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 PON2Q15165 354 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 TXNDC11Q6PKC3 985 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 PAQR9Q6ZVX9 377 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 FUKQ8N0W3 1084 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 ADSSL1Q8N142 457 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 SPEM1Q8N4L4 309 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 CPA6Q8N4T0 437 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 SH3RF2Q8TEC5 729 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 ATP2A3Q93084 1043 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 NT5C1AQ9BXI3 368 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 TMEM30AQ9NV96 361 aa24.75■■□□□ 1.55
LSM7-204ENST00000587502 PSMA7O14818 248 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 ABL1P00519 1130 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 MXI1P50539 228 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 SLC7A9P82251 487 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 GRSF1Q12849 480 aaKnown RBP eCLIP24.74■■□□□ 1.55
LSM7-204ENST00000587502 ANKRD40Q6AI12 368 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 TRIM68Q6AZZ1 485 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 ZC3H3Q8IXZ2 948 aaKnown RBP24.74■■□□□ 1.55
LSM7-204ENST00000587502 FBXL13Q8NEE6 735 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 FBXO32Q969P5 355 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 DHTKD1Q96HY7 919 aaPredicted RBP24.74■■□□□ 1.55
LSM7-204ENST00000587502 KCNK16Q96T55 309 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 FAM124BQ9H5Z6 455 aaPredicted RBP24.74■■□□□ 1.55
LSM7-204ENST00000587502 APOBEC3GQ9HC16 384 aaKnown RBP24.74■■□□□ 1.55
LSM7-204ENST00000587502 KRT82Q9NSB4 513 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 FAM186AA6NE01 2351 aa24.74■■□□□ 1.55
LSM7-204ENST00000587502 CXCL12P48061 93 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 NR1H3Q13133 447 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 WDR44Q5JSH3 913 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 DDX42Q86XP3 938 aaKnown RBP eCLIP24.73■■□□□ 1.55
LSM7-204ENST00000587502 RIN3Q8TB24 985 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 SLC2A14Q8TDB8 520 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 NELL1Q92832 810 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 EEF2KMTQ96G04 330 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 FBXO44Q9H4M3 255 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 CSNK1G1Q9HCP0 422 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 RAB20Q9NX57 234 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 IL37Q9NZH6 218 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 FANCMQ8IYD8 2048 aa24.73■■□□□ 1.55
LSM7-204ENST00000587502 TRDMT1O14717 391 aaKnown RBP24.72■■□□□ 1.55
LSM7-204ENST00000587502 TNFRSF10BO14763 440 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 OLFM2O95897 454 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 OAS1P00973 400 aaKnown RBP24.72■■□□□ 1.55
LSM7-204ENST00000587502 FAM200BP0CF97 657 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 ARSAP15289 507 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 SLC5A3P53794 718 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 IFRD2Q12894 506 aaPredicted RBP24.72■■□□□ 1.55
LSM7-204ENST00000587502 CCINQ13939 588 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 ZBTB44Q8NCP5 570 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 TTC16Q8NEE8 873 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 ERCC4Q92889 916 aaPredicted RBP24.72■■□□□ 1.55
LSM7-204ENST00000587502 HNRNPABQ99729 332 aaKnown RBP24.72■■□□□ 1.55
LSM7-204ENST00000587502 ECT2Q9H8V3 914 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.72■■□□□ 1.553e-9■■■■□ 24
LSM7-204ENST00000587502 HMGXB4Q9UGU5 601 aa24.72■■□□□ 1.55
LSM7-204ENST00000587502 CILPO75339 1184 aa24.71■■□□□ 1.55
LSM7-204ENST00000587502 CCDC130P13994 396 aa24.71■■□□□ 1.55
LSM7-204ENST00000587502 ORC1Q13415 861 aa24.71■■□□□ 1.55
LSM7-204ENST00000587502 TCERG1LQ5VWI1 586 aa24.71■■□□□ 1.55
LSM7-204ENST00000587502 SNX30Q5VWJ9 437 aa24.71■■□□□ 1.55
LSM7-204ENST00000587502 C12orf29Q8N999 325 aa24.71■■□□□ 1.55
LSM7-204ENST00000587502 CYFIP2Q96F07 1278 aa24.71■■□□□ 1.55
LSM7-204ENST00000587502 METTL14Q9HCE5 456 aaKnown RBP24.71■■□□□ 1.55
LSM7-204ENST00000587502 ARMCX3Q9UH62 379 aaPredicted RBP24.71■■□□□ 1.55
LSM7-204ENST00000587502 FAM92AA1XBS5 289 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 OTOL1A6NHN0 477 aaPredicted RBP24.7■■□□□ 1.54
LSM7-204ENST00000587502 LEFTY2O00292 366 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 SLC9A3R1O14745 358 aaPredicted RBP24.7■■□□□ 1.54
LSM7-204ENST00000587502 PAPSS2O95340 614 aaPredicted RBP24.7■■□□□ 1.54
LSM7-204ENST00000587502 NFATC1O95644 943 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 TUBP50607 506 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 EML3Q32P44 896 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 DCAF17Q5H9S7 520 aaPredicted RBP24.7■■□□□ 1.54
LSM7-204ENST00000587502 TMEM196Q5HYL7 178 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 HECTD3Q5T447 861 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 SCAMP5Q8TAC9 235 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 CEP63Q96MT8 703 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 SMOQ99835 787 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 RNF38Q9H0F5 515 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 RBM12Q9NTZ6 932 aaKnown RBP24.7■■□□□ 1.54
LSM7-204ENST00000587502 FAM49BQ9NUQ9 324 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 MAN1B1Q9UKM7 699 aa24.7■■□□□ 1.54
LSM7-204ENST00000587502 CPQQ9Y646 472 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms