RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 MYADMQ96S97 322 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 STRA6Q9BX79 667 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 PANK2Q9BZ23 570 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 MRPL44Q9H9J2 332 aaKnown RBP10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 OLFML3Q9NRN5 406 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 WNT16Q9UBV4 365 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 TUBGCP4Q9UGJ1 667 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 MCM8Q9UJA3 840 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 CDH7Q9ULB5 785 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 EXOC7Q9UPT5 735 aa10.62□□□□□ -0.71
HNRNPC-228ENST00000557033 WDR27A2RRH5 827 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 SLC22A31A6NKX4 558 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 ANKRD63C9JTQ0 380 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 SPTLC2O15270 562 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 CCL16O15467 120 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 YEATS4O95619 227 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 HSP90AA1P07900 732 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 NME1P15531 152 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 PTPN2P17706 415 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 AARSP49588 968 aaKnown RBP eCLIP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 YWHAHQ04917 246 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 SPAG1Q07617 926 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 ALCAMQ13740 583 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 PCSK7Q16549 785 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 NFE2Q16621 373 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 CTXN3Q4LDR2 81 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 CT47A1Q5JQC4 288 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 ZBTB41Q5SVQ8 909 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 FOXB2Q5VYV0 432 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 ATL3Q6DD88 541 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 ZNF280DQ6N043 979 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 GET4Q7L5D6 327 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 SFR1Q86XK3 245 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 TCEAL8Q8IYN2 117 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 BEST2Q8NFU1 509 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 RELTQ969Z4 430 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 SMOC2Q9H3U7 446 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 CUEDC2Q9H467 287 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 AVENQ9NQS1 362 aaPredicted RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 AGO2Q9UKV8 859 aaKnown RBP10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 C2CD2Q9Y426 696 aa10.61□□□□□ -0.71
HNRNPC-228ENST00000557033 FRMD3A2A2Y4 597 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 PIRO00625 290 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 PRRG1O14668 218 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 PLD2O14939 933 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 CUTAO60888 179 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 LDHAP00338 332 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 PDGFBP01127 241 aaPredicted RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 LRG1P02750 347 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 GSTP1P09211 210 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 SRFP11831 508 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 L1CAMP32004 1257 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 ACOT2P49753 483 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 VCPP55072 806 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 ARPP19P56211 112 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 NHLH1Q02575 133 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 DBN1Q16643 649 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 PABPC1LQ4VXU2 614 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 FNDC3BQ53EP0 1204 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 L1TD1Q5T7N2 865 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 KIAA1211LQ6NV74 962 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 DSTYKQ6XUX3 929 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 MTSS1LQ765P7 747 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 TRIM46Q7Z4K8 759 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 CCDC65Q8IXS2 484 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 RSAD2Q8WXG1 361 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 POMGNT1Q8WZA1 660 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 FGF13Q92913 245 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 ABHD17AQ96GS6 310 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 ACCSQ96QU6 501 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 TNMDQ9H2S6 317 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 MFSD1Q9H3U5 465 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 TMEM206Q9H813 350 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 CYP4F11Q9HBI6 524 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 PANK4Q9NVE7 773 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 DNAJB12Q9NXW2 375 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 GMIPQ9P107 970 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 DNMT3BQ9UBC3 853 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 AFF4Q9UHB7 1163 aaKnown RBP10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 PCDHB10Q9UN67 800 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 MAPRE3Q9UPY8 281 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 CORINQ9Y5Q5 1042 aa10.6□□□□□ -0.71
HNRNPC-228ENST00000557033 ANO9A1A5B4 782 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 OR6C75A6NL08 312 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 ZNF197O14709 1029 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 IL18RAPO95256 599 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 GCNT3O95395 438 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 ZSCAN22P10073 491 aaPredicted RBP10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 IDEP14735 1019 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 TYMPP19971 482 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 ADSSP30520 456 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 EPHB1P54762 984 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 LILRA4P59901 499 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 NTHL1P78549 312 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 HTR4Q13639 388 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 TMEM132DQ14C87 1099 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 C9orf57Q5W0N0 161 aa10.59□□□□□ -0.71
HNRNPC-228ENST00000557033 JADE1Q6IE81 842 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms